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Tex13c3 TEX13 family member C3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100360128, updated on 17-Aug-2024

Summary

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Official Symbol
Tex13c3provided by RGD
Official Full Name
TEX13 family member C3provided by RGD
Primary source
RGD:2322721
See related
AllianceGenome:RGD:2322721
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Lung (RPKM 7.6), Testes (RPKM 6.6) and 9 other tissues See more
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Genomic context

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See Tex13c3 in Genome Data Viewer
Location:
Xq35
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (122017204..122018753)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (117151627..117153132)
106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (124692036..124693840)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 255A Neighboring gene ATPase Na+/K+ transporting family member beta 4 Neighboring gene lysosomal-associated membrane protein 2 Neighboring gene ragulator complex protein LAMTOR5-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
testis-expressed protein 13C-1-like
Names
testis-expressed sequence 13C protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    122017204..122018753
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002730175.5 → XP_002730221.1  testis-expressed protein 13C-1-like

    See identical proteins and their annotated locations for XP_002730221.1

    UniProtKB/TrEMBL
    A0A8I6G6Y1
    Conserved Domains (1) summary
    pfam15186
    Location:6 → 148
    TEX13; Testis-expressed sequence 13 protein family
Nucleotide Protein Strain
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