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tbc1d8 TBC1 domain family member 8 [ Danio rerio (zebrafish) ]

Gene ID: 100333881, updated on 12-Sep-2024

Summary

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Gene symbol
tbc1d8
Gene description
TBC1 domain family member 8
See related
Ensembl:ENSDARG00000104493
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
human mouse all
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Genomic context

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See tbc1d8 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (56194428..56226195)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (56605743..56634253)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137496516 Neighboring gene ectodysplasin A receptor Neighboring gene uncharacterized LOC100333807 Neighboring gene ribosomal protein L31 Neighboring gene CCR4-NOT transcription complex, subunit 11 Neighboring gene lymphocyte cytosolic protein 1 (L-plastin)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

General protein information

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Preferred Names
TBC1 domain family member 8
Names
TBC1 domain family, member 8 (with GRAM domain)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    56194428..56226195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002663446.7 → XP_002663492.4  TBC1 domain family member 8

    UniProtKB/TrEMBL
    A0A8M1RDS6
    Related
    ENSDARP00000134284.2, ENSDART00000168530.2
    Conserved Domains (4) summary
    smart00054
    Location:838 → 861
    EFh; EF-hand, calcium binding motif
    smart00164
    Location:468 → 677
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    pfam13499
    Location:811 → 861
    EF-hand_7; EF-hand domain pair
    cl17171
    Location:126 → 224
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials