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si:ch1073-303k11.2 si:ch1073-303k11.2 [ Danio rerio (zebrafish) ]

Gene ID: 100333296, updated on 4-Jan-2025

Summary

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Official Symbol
si:ch1073-303k11.2provided by ZNC
Official Full Name
si:ch1073-303k11.2provided by ZNC
Primary source
ZFIN:ZDB-GENE-141216-99
See related
AllianceGenome:ZFIN:ZDB-GENE-141216-99
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Orthologous to human LRRN4CL (LRRN4 C-terminal like). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See si:ch1073-303k11.2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (1111336..1119845)
105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (1081769..1101541)

Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene coagulation factor VIII, procoagulant component Neighboring gene solute carrier family 16 member 2 Neighboring gene SEC24 homolog B, COPII coat complex component Neighboring gene HOP homeobox

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
LRRN4 C-terminal-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007125.7 Reference GRCz11 Primary Assembly

    Range
    1111336..1119845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021481079.2 → XP_021336754.1  LRRN4 C-terminal-like protein

    UniProtKB/TrEMBL
    A0A8M9QGI4
Nucleotide Protein Strain
Heading Accession and Version

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