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or70a5 olfactory receptor, family 70, subfamily A, member 5 [ Danio rerio (zebrafish) ]

Gene ID: 100331737, updated on 4-Jan-2025

Summary

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Official Symbol
or70a5provided by ZNC
Official Full Name
olfactory receptor, family 70, subfamily A, member 5provided by ZNC
Primary source
ZFIN:ZDB-GENE-091116-94
See related
Ensembl:ENSDARG00000094505 AllianceGenome:ZFIN:ZDB-GENE-091116-94
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:ch211-218m3.9
Summary
Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be active in membrane. Orthologous to several human genes including OR1A1 (olfactory receptor family 1 subfamily A member 1); OR1A2 (olfactory receptor family 1 subfamily A member 2); and OR1C1 (olfactory receptor family 1 subfamily C member 1). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See or70a5 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (40248175..40250492, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (40225372..40226942, complement)

Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene odorant receptor, family 70, subfamily A, member 4 Neighboring gene odorant receptor, family 70, subfamily A, member 13 Neighboring gene odorant receptor, family 70, subfamily A, member 16 Neighboring gene olfactory receptor, family 70, subfamily A, member 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Molecular and neuronal homology between the olfactory systems of zebrafish and mouse. Saraiva LR, et al. Sci Rep, 2015 Jun 25. PMID 26108469, Free PMC Article
  2. A unified nomenclature for vertebrate olfactory receptors. Olender T, et al. BMC Evol Biol, 2020 Apr 15. PMID 32295537, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
  
enables odorant binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
involved_in detection of chemical stimulus involved in sensory perception of smell IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
olfactory receptor 52N5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007132.7 Reference GRCz11 Primary Assembly

    Range
    40248175..40250492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002666063.4 → XP_002666109.1  olfactory receptor 52N5-like

    UniProtKB/TrEMBL
    A0A8M1RHZ3, E9QFE0
    Related
    ENSDARP00000114448.1, ENSDART00000141008.3
    Conserved Domains (2) summary
    pfam00001
    Location:41 → 291
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:33 → 305
    7tm_4; Olfactory receptor
Nucleotide Protein Strain
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