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si:dkey-58i8.5 si:dkey-58i8.5 [ Danio rerio (zebrafish) ]

Gene ID: 100329858, updated on 9-Dec-2024

Summary

Official Symbol
si:dkey-58i8.5provided by ZNC
Official Full Name
si:dkey-58i8.5provided by ZNC
Primary source
ZFIN:ZDB-GENE-160728-66
See related
AllianceGenome:ZFIN:ZDB-GENE-160728-66
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See si:dkey-58i8.5 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (39721815..39722734)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (39447491..39451916)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene TBC1 domain family, member 14 Neighboring gene chemokine (C-C motif) ligand 36, duplicate 1 Neighboring gene serine/threonine-protein kinase pim-3-like Neighboring gene cilia and flagella associated protein 184 Neighboring gene transcriptional adaptor 2B Neighboring gene GrpE-like 1, mitochondrial

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of mitotic cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
serine/threonine-protein kinase pim-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    39721815..39722734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002662850.6XP_002662896.4  serine/threonine-protein kinase pim-2-like

    UniProtKB/TrEMBL
    A0A8M9QH95