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HERC2P4 HERC2 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100289574, updated on 10-Dec-2024

Summary

Official Symbol
HERC2P4provided by HGNC
Official Full Name
HERC2 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:4872
See related
AllianceGenome:HGNC:4872
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
D16F37S5
Expression
Broad expression in placenta (RPKM 1.1), testis (RPKM 1.1) and 23 other tissues See more
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Genomic context

See HERC2P4 in Genome Data Viewer
Location:
16p11.2
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (32170043..32188113, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (32557489..32575559, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (32181364..32199434, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene immunoglobulin heavy variable 3/OR16-9 (non-functional) Neighboring gene translation initiation factor IF-2-like Neighboring gene COX assembly mitochondrial protein 2 homolog Neighboring gene ABHD17A pseudogene 8

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • HECT and RLD domain containing E3 ubiquitin protein ligase 2 pseudogene
  • hect domain and RLD 2 pseudogene 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_109773.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC133485

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    32170043..32188113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    32557489..32575559 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)