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RPS29P25 ribosomal protein S29 pseudogene 25 [ Homo sapiens (human) ]

Gene ID: 100271590, updated on 17-Sep-2024

Summary

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Official Symbol
RPS29P25provided by HGNC
Official Full Name
ribosomal protein S29 pseudogene 25provided by HGNC
Primary source
HGNC:HGNC:35649
See related
Ensembl:ENSG00000243581 AllianceGenome:HGNC:35649
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS29_19_1654
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Genomic context

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See RPS29P25 in Genome Data Viewer
Location:
19q13.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (39590981..39591151)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (42395245..42395415)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (40081621..40081791)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372399 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14624 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10612 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14625 Neighboring gene ribosomal protein S29 pseudogene 24 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr19:40086129-40087328 Neighboring gene MPRA-validated peak3478 silencer Neighboring gene ribosomal protein S29 pseudogene 26 Neighboring gene galectin 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011183.1 

    Range
    101..271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    39590981..39591151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    42395245..42395415
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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