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RPS3AP12 RPS3A pseudogene 12 [ Homo sapiens (human) ]

Gene ID: 100270905, updated on 10-Dec-2024

Summary

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Official Symbol
RPS3AP12provided by HGNC
Official Full Name
RPS3A pseudogene 12provided by HGNC
Primary source
HGNC:HGNC:35527
See related
Ensembl:ENSG00000236804 AllianceGenome:HGNC:35527
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS3A_1_92
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Genomic context

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See RPS3AP12 in Genome Data Viewer
Location:
1p12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (119126495..119127311, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (119139721..119140537, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (119669118..119669934, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene tryptophanyl tRNA synthetase 2, mitochondrial Neighboring gene WARS2 intronic transcript 1 Neighboring gene MPRA-validated peak395 silencer Neighboring gene RBMX2 pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1590 Neighboring gene WARS2 antisense RNA 1 Neighboring gene ribosomal protein L6 pseudogene 2 Neighboring gene uncharacterized LOC107985192

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • ribosomal protein S3a pseudogene 12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010299.1 

    Range
    101..917
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    119126495..119127311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    119139721..119140537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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