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rpz2 rapunzel 2 [ Danio rerio (zebrafish) ]

Gene ID: 100270758, updated on 4-Jan-2025

Summary

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Official Symbol
rpz2provided by ZNC
Official Full Name
rapunzel 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-9071
See related
Ensembl:ENSDARG00000091215 AllianceGenome:ZFIN:ZDB-GENE-030131-9071
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fa98e05; wu:fa98e05
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See rpz2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (46410520..46415964)
105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (46443804..46449248)

Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 2, group F, member 5 Neighboring gene uncharacterized LOC101886504 Neighboring gene uncharacterized LOC101886607 Neighboring gene rapunzel Neighboring gene protein rapunzel-like Neighboring gene rapunzel 6 Neighboring gene rapunzel 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A gain of function mutation causing skeletal overgrowth in the rapunzel mutant. Green J, et al. Dev Biol, 2009 Oct 1. PMID 19632218, Free PMC Article
  2. Β-catenin-dependent control of positional information along the AP body axis in planarians involves a teashirt family member. Reuter H, et al. Cell Rep, 2015 Jan 13. PMID 25558068
  3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
rapunzel 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001145241.1 → NP_001138713.1  rapunzel 2

    See identical proteins and their annotated locations for NP_001138713.1

    Status: PROVISIONAL

    Source sequence(s)
    FJ539170
    UniProtKB/TrEMBL
    B9VEN1
    Related
    ENSDARP00000106769.1, ENSDART00000131072.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007127.7 Reference GRCz11 Primary Assembly

    Range
    46410520..46415964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials