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LOC100243197 uncharacterized LOC100243197 [ Vitis vinifera (wine grape) ]

Gene ID: 100243197, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100243197
Gene description
uncharacterized LOC100243197
Locus tag
VIT_00025672001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100243197 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 8 NC_081812.1 (14203413..14217630, complement)
102 previous assembly 12X (GCF_000003745.3) 8 NC_012014.3 (13040787..13054933, complement)

Chromosome 8 - NC_081812.1Genomic Context describing neighboring genes Neighboring gene probable E3 ubiquitin-protein ligase LOG2 Neighboring gene uncharacterized LOC100265508 Neighboring gene fasciclin-like arabinogalactan protein 11 Neighboring gene fasciclin-like arabinogalactan protein 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC100243197
Names
dystrophia myotonica WD repeat-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081812.1 Reference ASM3070453v1 Primary Assembly

    Range
    14203413..14217630 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002280805.5 → XP_002280841.1  uncharacterized protein LOC100243197

    UniProtKB/TrEMBL
    F6HR18
    Conserved Domains (3) summary
    COG2319
    Location:113 → 540
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:234 → 276
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:300 → 545
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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Research Materials