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LOC100241507 M phase phosphoprotein 10 [ Vitis vinifera (wine grape) ]

Gene ID: 100241507, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100241507
Gene description
M phase phosphoprotein 10
Locus tag
VIT_00007723001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
Also known as
GO:0003677 GO:0003676 GO:0030529 GO:0005634
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Genomic context

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See LOC100241507 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 17 NC_081821.1 (10311314..10319530)
102 previous assembly 12X (GCF_000003745.3) 17 NC_012023.3 (9907377..9915578)

Chromosome 17 - NC_081821.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100853033 Neighboring gene uncharacterized LOC100853506 Neighboring gene uncharacterized LOC100246841 Neighboring gene uncharacterized LOC100250137

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mpp10 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sno(s)RNA-containing ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
M phase phosphoprotein 10
Names
U3 small nucleolar ribonucleoprotein protein MPP10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081821.1 Reference ASM3070453v1 Primary Assembly

    Range
    10311314..10319530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003634198.4 → XP_003634246.1  M phase phosphoprotein 10

    UniProtKB/TrEMBL
    F6GSM4
    Conserved Domains (1) summary
    COG5384
    Location:7 → 532
    Mpp10; U3 small nucleolar ribonucleoprotein component [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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