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TRR-TCT3-2 tRNA-Arg (anticodon TCT) 3-2 [ Homo sapiens (human) ]

Gene ID: 100189115, updated on 10-Dec-2024

Summary

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Official Symbol
TRR-TCT3-2provided by HGNC
Official Full Name
tRNA-Arg (anticodon TCT) 3-2provided by HGNC
Primary source
HGNC:HGNC:34677
See related
AllianceGenome:HGNC:34677
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAR14; TRR-TCT3-1
Expression
Low expression observed in reference dataset See more
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Genomic context

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See TRR-TCT3-2 in Genome Data Viewer
Location:
11q12.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (59551294..59551379)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (59502174..59502259)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (59318767..59318852)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102723575 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:59318146-59318647 Neighboring gene tRNA-Val (anticodon TAC) 1-1 Neighboring gene tRNA-Val (anticodon TAC) 2-1 Neighboring gene tRNA-Leu (anticodon TAA) 3-1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3364 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:59323862-59324052 Neighboring gene tRNA-Lys (anticodon TTT) 5-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Arg-TCT-3-2
  • transfer RNA arginine 14 (anticodon UCU)
  • transfer RNA-Arg (TCT) 3-1
  • transfer RNA-Arg (TCT) 3-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    59551294..59551379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    59502174..59502259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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