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TUBGCP4 tubulin gamma complex component 4 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100174159, updated on 26-Mar-2024

Summary

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Gene symbol
TUBGCP4
Gene description
tubulin gamma complex component 4
Locus tag
CR201_G0045983
See related
Ensembl:ENSPPYG00000006413
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See TUBGCP4 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 16 NC_072001.2 (46295215..46334463)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 15 NC_072000.1 (43574857..43610481)

Chromosome 16 - NC_072001.2Genomic Context describing neighboring genes Neighboring gene leucine carboxyl methyltransferase 2 Neighboring gene N6-Methyl-AMP deaminase Neighboring gene zinc finger and SCAN domain containing 29 Neighboring gene tumor protein p53 binding protein 1 Neighboring gene microtubule associated protein 1A Neighboring gene diphosphoinositol pentakisphosphate kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp459O2210

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule minus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in equatorial microtubule organizing center IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of gamma-tubulin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-tubulin complex component 4
Names
tubulin gamma complex associated protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072001.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    46295215..46334463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009249771.4 → XP_009248046.1  gamma-tubulin complex component 4 isoform X2

    UniProtKB/TrEMBL
    A0A2J8S5B2, Q5NVE4
    Conserved Domains (1) summary
    pfam04130
    Location:4 → 572
    Spc97_Spc98; Spc97 / Spc98 family

  2. XM_002825372.6 → XP_002825418.1  gamma-tubulin complex component 4 isoform X1

    UniProtKB/TrEMBL
    A0A2J8S591, H2NN13, Q5NVE4
    Related
    ENSPPYP00000007266.2
    Conserved Domains (1) summary
    pfam04130
    Location:4 → 573
    Spc97_Spc98; Spc97 / Spc98 family

  3. XM_009249772.4 → XP_009248047.1  gamma-tubulin complex component 4 isoform X3

    UniProtKB/TrEMBL
    A0A2J8S5A7, A0A8I5TFC5
    Related
    ENSPPYP00000035825.1
    Conserved Domains (1) summary
    pfam04130
    Location:4 → 573
    Spc97_Spc98; Spc97 / Spc98 family

  4. XM_024232800.3 → XP_024088568.1  gamma-tubulin complex component 4 isoform X4

    UniProtKB/TrEMBL
    A0A2J8S5A7
    Conserved Domains (1) summary
    pfam04130
    Location:4 → 572
    Spc97_Spc98; Spc97 / Spc98 family
Nucleotide Protein
Heading Accession and Version

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