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fblim1.S filamin binding LIM protein 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100137707, updated on 4-Jan-2025

Summary

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Official Symbol
fblim1.S
Official Full Name
filamin binding LIM protein 1 S homeolog
Primary source
Xenbase:XB-GENE-1193996
Locus tag
XELAEV_18037963mg
See related
EnsemblRapid:ENSXLAG00005011884 AllianceGenome:Xenbase:XB-GENE-1193996
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
fblim1
Summary
Predicted to enable metal ion binding activity. Orthologous to human FBLIM1 (filamin binding LIM protein 1). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See fblim1.S in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (111779132..111792275, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (85577981..85591664)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene spen family transcriptional repressor S homeolog Neighboring gene uncharacterized LOC121396066 Neighboring gene pleckstrin homology and RUN domain containing M2 S homeolog Neighboring gene uncharacterized LOC108697866 Neighboring gene protein-arginine deiminase type-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
filamin binding LIM protein 1 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001114834.1 → NP_001108306.1  filamin binding LIM protein 1 S homeolog

    See identical proteins and their annotated locations for NP_001108306.1

    Status: PROVISIONAL

    Source sequence(s)
    BC155936
    UniProtKB/TrEMBL
    A0A974CD22, A9UL57
    Related
    ENSXLAP00005034796.1, ENSXLAT00005035679.1
    Conserved Domains (2) summary
    cd09372
    Location:254 → 306
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:314 → 375
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    111779132..111792275 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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