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znf1065 zinc finger protein 1065 [ Danio rerio (zebrafish) ]

Gene ID: 100126129, updated on 9-Dec-2024

Summary

Official Symbol
znf1065provided by ZNC
Official Full Name
zinc finger protein 1065provided by ZNC
Primary source
ZFIN:ZDB-GENE-071004-94
See related
Ensembl:ENSDARG00000090366 AllianceGenome:ZFIN:ZDB-GENE-071004-94
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:171626
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF572 (zinc finger protein 572) and ZNF774 (zinc finger protein 774). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See znf1065 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (33422292..33428994)

Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene uncharacterized LOC110439429 Neighboring gene uncharacterized LOC137490896 Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

Genomic Sequence:
NC_007115.7 Chromosome 4 Reference GRCz11 Primary Assembly

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC100126129; zinc finger protein 568

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007115.7 Reference GRCz11 Primary Assembly

    Range
    33422292..33428994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068219839.1XP_068075940.1  zinc finger protein 568

  2. XM_068219838.1XP_068075939.1  zinc finger protein 568

    Related
    ENSDARP00000125218.1, ENSDART00000150868.2

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001109855.1: Suppressed sequence

    Description
    NM_001109855.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: ZNF808 (GeneID:388558).