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Pet117 PET117 homolog [ Mus musculus (house mouse) ]

Gene ID: 100048644, updated on 9-Dec-2024

Summary

Official Symbol
Pet117provided by MGI
Official Full Name
PET117 homologprovided by MGI
Primary source
MGI:MGI:5295678
See related
Ensembl:ENSMUSG00000098387 AllianceGenome:MGI:5295678
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm20571
Summary
Predicted to be involved in mitochondrial cytochrome c oxidase assembly. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in mitochondrial complex IV deficiency nuclear type 19. Orthologous to human PET117 (PET117 cytochrome c oxidase chaperone). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 8.9), placenta adult (RPKM 5.1) and 28 other tissues See more
Orthologs
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Genomic context

See Pet117 in Genome Data Viewer
Location:
2 G1; 2 71.01 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (144210903..144215257)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (144368983..144373337)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase A pseudogene 2_1789.1 Neighboring gene STARR-seq mESC enhancer starr_05912 Neighboring gene calcium binding and coiled-coil domain 2 pseudogene Neighboring gene lysine acetyltransferase 14 Neighboring gene STARR-seq mESC enhancer starr_05913 Neighboring gene predicted gene, 46768 Neighboring gene zinc finger protein 133, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in mitochondrial cytochrome c oxidase assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
protein PET117 homolog, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164813.1NP_001158285.1  protein PET117 homolog, mitochondrial precursor

    See identical proteins and their annotated locations for NP_001158285.1

    Status: PROVISIONAL

    Source sequence(s)
    AL808123
    Consensus CDS
    CCDS71155.1
    UniProtKB/Swiss-Prot
    P0DJF2
    Related
    ENSMUSP00000139043.2, ENSMUST00000183618.3
    Conserved Domains (1) summary
    pfam15786
    Location:568
    PET117; PET assembly of cytochrome c oxidase, mitochondrial

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    144210903..144215257
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)