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Scgb2b18 secretoglobin, family 2B, member 18 [ Mus musculus (house mouse) ]

Gene ID: 100043856, updated on 27-Nov-2024

Summary

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Official Symbol
Scgb2b18provided by MGI
Official Full Name
secretoglobin, family 2B, member 18provided by MGI
Primary source
MGI:MGI:3782872
See related
Ensembl:ENSMUSG00000100058 AllianceGenome:MGI:3782872
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm4692; Abpbg18
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Genomic context

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See Scgb2b18 in Genome Data Viewer
Location:
7 B1; 7 19.35 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (32871317..32873286, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (33171892..33173861, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene 6003 Neighboring gene STARR-seq mESC enhancer starr_18563 Neighboring gene secretoglobin, family 2B, member 19 Neighboring gene secretoglobin, family 1B, member 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Update of the human secretoglobin (SCGB) gene superfamily and an example of 'evolutionary bloom' of androgen-binding protein genes within the mouse Scgb gene superfamily. Jackson BC, et al. Hum Genomics, 2011 Oct. PMID 22155607, Free PMC Article
  2. Rapid bursts of androgen-binding protein (Abp) gene duplication occurred independently in diverse mammals. Laukaitis CM, et al. BMC Evol Biol, 2008 Feb 12. PMID 18269759, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
secretoglobin, family 2B, member 18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001310621.1 → NP_001297550.1  secretoglobin, family 2B, member 18 precursor

    See identical proteins and their annotated locations for NP_001297550.1

    Status: VALIDATED

    Source sequence(s)
    AC131802
    Consensus CDS
    CCDS80701.1
    UniProtKB/TrEMBL
    A0A087WPA9
    Related
    ENSMUSP00000139701.2, ENSMUST00000186529.2
    Conserved Domains (1) summary
    pfam09252
    Location:24 → 90
    Feld-I_B; Allergen Fel d I-B chain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    32871317..32873286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006540498.1 → XP_006540561.1  secretoglobin, family 2B, member 18 isoform X1

    See identical proteins and their annotated locations for XP_006540561.1

    Conserved Domains (1) summary
    pfam09252
    Location:24 → 59
    Feld-I_B; Allergen Fel d I-B chain
Nucleotide Protein Strain
Heading Accession and Version

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