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Hmgb1-ps5 high mobility group box 1, pseudogene 5 [ Mus musculus (house mouse) ]

Gene ID: 100043312, updated on 17-Aug-2024

Summary

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Official Symbol
Hmgb1-ps5provided by MGI
Official Full Name
high mobility group box 1, pseudogene 5provided by MGI
Primary source
MGI:MGI:3776505
See related
Ensembl:ENSMUSG00000083822 AllianceGenome:MGI:3776505
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hmg-E; Gm15447
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Genomic context

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See Hmgb1-ps5 in Genome Data Viewer
Location:
3 F2.1; 3 40.74 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (95437723..95438350)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (95530412..95531039)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_08385 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:95315769-95315952 Neighboring gene cathepsin K Neighboring gene STARR-positive B cell enhancer ABC_E7927 Neighboring gene predicted gene, 40096 Neighboring gene cathepsin S Neighboring gene HORMA domain containing 1 Neighboring gene STARR-positive B cell enhancer mm9_chr3:95392515-95392816 Neighboring gene predicted gene, 40097 Neighboring gene golgi phosphoprotein 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Recent integrations of mammalian Hmg retropseudogenes. Tecle E, et al. J Genet, 2006 Dec. PMID 17406091

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Other Names

  • High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_017381.1 

    Range
    101..728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    95437723..95438350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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