These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001291093.1 → NP_001278022.1  alpha38-takusan isoform a

   See identical proteins and their annotated locations for NP_001278022.1

   Status: VALIDATED

   Description

   Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).

   Source sequence(s)

   AC168071, BB672657, EF651835

   UniProtKB/TrEMBL

   A6NAS6, A6NAV5

   Related

   ENSMUSP00000108378.4, ENSMUST00000112758.10

   Conserved Domains (1) summary

   pfam04822
   Location:80 → 160

   Takusan

2. NM_001291094.1 → NP_001278023.1  alpha38-takusan isoform b

   See identical proteins and their annotated locations for NP_001278023.1

   Status: VALIDATED

   Description

   Transcript Variant: This variant (2) contains an alternate 5' terminal exon and uses an alternate splice site in its 3' terminal exon, and it thus differs in the 5' UTR, initiates translation at a downstream in-frame start codon, and differs in the 3' coding region, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus and has a distinct C-terminus, compared to isoform a.

   Source sequence(s)

   AC165952, AC168071, BB672657

   UniProtKB/TrEMBL

   A6NAR8, A6NAU9, Q4FK70

   Conserved Domains (1) summary

   pfam04822
   Location:1 → 73

   Takusan

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference GRCm39 C57BL/6J

Genomic

1. NC_000080.7 Reference GRCm39 C57BL/6J

   Range

   16656303..16679217

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_036158311.1 → XP_036014204.1  alpha38-takusan isoform X2

   UniProtKB/TrEMBL

   A6NAR8, A6NAU9, Q4FK70

   Conserved Domains (1) summary

   pfam04822
   Location:1 → 73

   Takusan

2. XM_036158310.1 → XP_036014203.1  alpha38-takusan isoform X1

   Conserved Domains (1) summary

   pfam04822
   Location:160 → 240

   Takusan

The following Reference Sequences have been suppressed. Explain

These RefSeqs were suppressed for the cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related sequence links, or BLAST links (BLink), but may still be retrieved by clicking on their accession.version below.

1. NM_001205306.1: Suppressed sequence

   Description

   NM_001205306.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.