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Mup16 major urinary protein 16 [ Mus musculus (house mouse) ]

Gene ID: 100039177, updated on 27-Nov-2024

Summary

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Official Symbol
Mup16provided by MGI
Official Full Name
major urinary protein 16provided by MGI
Primary source
MGI:MGI:3780250
See related
Ensembl:ENSMUSG00000078675 AllianceGenome:MGI:3780250
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mup6
Summary
Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward liver adult (RPKM 1783.9) See more
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Genomic context

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See Mup16 in Genome Data Viewer
Location:
4 B3; 4 32.88 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (61433829..61437864, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (61515592..61519627, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene major urinary protein, pseudogene 11 Neighboring gene major urinary protein, pseudogene 12 Neighboring gene major urinary protein 15 Neighboring gene major urinary protein 17 Neighboring gene major urinary protein, pseudogene 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Mapping the structural genes coding for the major urinary proteins in the mouse: combined use of recombinant inbred strains and somatic cell hybrids. Bennett KL, et al. Proc Natl Acad Sci U S A, 1982 Feb. PMID 6951169, Free PMC Article
  2. The 45-kb unit of major urinary protein gene organization is a gigantic imperfect palindrome. Bishop JO, et al. Mol Cell Biol, 1985 Jul. PMID 4022008, Free PMC Article
  3. Variation in the major urinary protein multigene family in wild-derived mice. Sampsell BM, et al. Genetics, 1985 Mar. PMID 3979814, Free PMC Article
  4. Intraspecific evolution of a gene family coding for urinary proteins. al-Shawi R, et al. J Mol Evol, 1989 Oct. PMID 2514272
  5. The gene family for major urinary proteins: expression in several secretory tissues of the mouse. Shaw PH, et al. Cell, 1983 Mar. PMID 6831559

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
major urinary protein 16
Names
Alpha-2U-globulin
Group 1, BS6
MUP 6
Major urinary protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001199936.1 → NP_001186865.1  major urinary protein 16 precursor

    See identical proteins and their annotated locations for NP_001186865.1

    Status: VALIDATED

    Source sequence(s)
    AW112504, CU041251
    Consensus CDS
    CCDS57278.1
    UniProtKB/Swiss-Prot
    P02762, P11589, P70119, Q78EF5, Q91V46, Q99JF6
    UniProtKB/TrEMBL
    A2CGB6, B5TE76
    Related
    ENSMUSP00000103107.2, ENSMUST00000107483.8
    Conserved Domains (1) summary
    cd19428
    Location:23 → 180
    lipocalin_MUP-like; major urinary proteins (MUPs) and similar proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    61433829..61437864 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006537489.4 → XP_006537552.1  major urinary protein 16 isoform X1

    See identical proteins and their annotated locations for XP_006537552.1

    UniProtKB/TrEMBL
    A9C496
    Conserved Domains (1) summary
    cd19428
    Location:23 → 172
    lipocalin_MUP-like; major urinary proteins (MUPs) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P02762.2 GenPept UniProtKB/Swiss-Prot:P02762

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials