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Mir223hg Mir223 host gene [ Mus musculus (house mouse) ]

Gene ID: 100038363, updated on 2-Nov-2024

Summary

Official Symbol
Mir223hgprovided by MGI
Official Full Name
Mir223 host geneprovided by MGI
Primary source
MGI:MGI:3641813
See related
Ensembl:ENSMUSG00000078122 AllianceGenome:MGI:3641813
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm14924; mir-223; lnc15847; F630028O10Rik
Summary
Is expressed in several structures, including heart; intestine; liver; lung; and metanephros. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in liver E18 (RPKM 18.8), liver E14 (RPKM 8.1) and 4 other tissues See more
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Genomic context

See Mir223hg in Genome Data Viewer
Location:
X C3; X 42.69 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (95283532..95287248)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (96239926..96243642)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene 14925 Neighboring gene solute carrier family 37 (glycerol-3-phosphate transporter), member 3 pseudogene Neighboring gene microRNA 223 Neighboring gene V-set and immunoglobulin domain containing 4 Neighboring gene predicted gene, 18171 Neighboring gene heat shock transcription factor 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_030718.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI464954, AK036748, BY205458
    Related
    ENSMUST00000133125.5

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    95283532..95287248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)