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gpam.S glycerol-3-phosphate acyltransferase, mitochondrial S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100037242, updated on 4-Jan-2025

Summary

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Official Symbol
gpam.S
Official Full Name
glycerol-3-phosphate acyltransferase, mitochondrial S homeolog
Primary source
Xenbase:XB-GENE-6254972
Locus tag
XELAEV_18036614mg
See related
EnsemblRapid:ENSXLAG00005018489 AllianceGenome:Xenbase:XB-GENE-6254972
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
gpam; gpat; gpat1
Summary
Predicted to enable glycerol-3-phosphate O-acyltransferase activity. Predicted to act upstream of or within CDP-diacylglycerol biosynthetic process. Predicted to be located in mitochondrial outer membrane and plasma membrane. Is expressed in anatomical system; ectoderm; mesenchyme; and pharyngeal arch. Orthologous to human GPAM (glycerol-3-phosphate acyltransferase, mitochondrial). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See gpam.S in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
22
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (890443..913028)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (908896..932017)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene inositol 1,4,5-trisphosphate receptor interacting protein S homeolog Neighboring gene tectorin beta S homeolog Neighboring gene lamina-associated polypeptide 2-like Neighboring gene adrenoceptor alpha 2A S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within CDP-diacylglycerol biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phospholipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
glycerol-3-phosphate acyltransferase, mitochondrial S homeolog
Names
mitochondrial glycerol 3-phosphate acyltransferase
NP_001091387.1
XP_041426217.1
XP_041426218.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097918.1 → NP_001091387.1  glycerol-3-phosphate acyltransferase, mitochondrial S homeolog

    See identical proteins and their annotated locations for NP_001091387.1

    Status: PROVISIONAL

    Source sequence(s)
    BC128670
    UniProtKB/TrEMBL
    A0A974CBS1, A1A5I8
    Related
    ENSXLAP00005054671.1, ENSXLAT00005055845.1
    Conserved Domains (2) summary
    cd07993
    Location:199 → 410
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
    COG2937
    Location:34 → 669
    PlsB; Glycerol-3-phosphate O-acyltransferase [Lipid transport and metabolism]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    890443..913028
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041570284.1 → XP_041426218.1  glycerol-3-phosphate acyltransferase, mitochondrial S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J1L9K5, A0A974CBS1
    Related
    ENSXLAP00005054683.1, ENSXLAT00005055857.1
    Conserved Domains (2) summary
    cd07993
    Location:218 → 429
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
    COG2937
    Location:53 → 688
    PlsB; Glycerol-3-phosphate O-acyltransferase [Lipid transport and metabolism]

  2. XM_041570283.1 → XP_041426217.1  glycerol-3-phosphate acyltransferase, mitochondrial S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1L9K3, A0A974CBS1
    Conserved Domains (2) summary
    cd07993
    Location:242 → 453
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
    COG2937
    Location:77 → 712
    PlsB; Glycerol-3-phosphate O-acyltransferase [Lipid transport and metabolism]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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