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znf865 zinc finger protein 865 [ Danio rerio (zebrafish) ]

Gene ID: 100034513, updated on 4-Jan-2025

Summary

Official Symbol
znf865provided by ZNC
Official Full Name
zinc finger protein 865provided by ZNC
Primary source
ZFIN:ZDB-GENE-060503-896
See related
Ensembl:ENSDARG00000036698 AllianceGenome:ZFIN:ZDB-GENE-060503-896
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-109n11.2
Summary
Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in telencephalon. Orthologous to human ZNF865 (zinc finger protein 865). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See znf865 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (10201165..10214239, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (10282240..10295572, complement)

Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a Neighboring gene uncharacterized LOC137488476 Neighboring gene D site albumin promoter binding protein a Neighboring gene shisa family member 7 Neighboring gene CCR4-NOT transcription complex, subunit 3b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
zinc finger protein 865
Names
novel zinc finger protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001083075.1NP_001076544.1  zinc finger protein 865

    See identical proteins and their annotated locations for NP_001076544.1

    Status: PROVISIONAL

    Source sequence(s)
    CR628325
    UniProtKB/TrEMBL
    A0A8M2B6A3, Q1L8T8
    Related
    ENSDARP00000125728.1, ENSDART00000151629.3
    Conserved Domains (2) summary
    sd00017
    Location:943963
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:956978
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007130.7 Reference GRCz11 Primary Assembly

    Range
    10201165..10214239 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005159402.4XP_005159459.1  zinc finger protein 865 isoform X1

    See identical proteins and their annotated locations for XP_005159459.1

    UniProtKB/TrEMBL
    A0A8M2B6A3, Q1L8T8
    Related
    ENSDARP00000053299.6, ENSDART00000053300.8
    Conserved Domains (2) summary
    sd00017
    Location:943963
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:956978
    zf-H2C2_2; Zinc-finger double domain
  2. XM_005159403.5XP_005159460.1  zinc finger protein 865 isoform X1

    See identical proteins and their annotated locations for XP_005159460.1

    UniProtKB/TrEMBL
    A0A8M2B6A3, Q1L8T8
    Conserved Domains (2) summary
    sd00017
    Location:943963
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:956978
    zf-H2C2_2; Zinc-finger double domain