ppp4r2b protein phosphatase 4, regulatory subunit 2b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ppp4r2bprovided by ZNC
Official Full Name: protein phosphatase 4, regulatory subunit 2bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-3008
See related: Ensembl:ENSDARG00000053447 AllianceGenome:ZFIN:ZDB-GENE-030131-3008
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: wu:fa17h08; wu:fc23g05
Summary: Predicted to enable protein phosphatase regulator activity. Predicted to be part of protein phosphatase 4 complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human PPP4R2 (protein phosphatase 4 regulatory subunit 2). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 6

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	6	NC_007117.7 (44197349..44207673)
105	previous assembly	GRCz10 (GCF_000002035.5)	6	NC_007117.6 (44199813..44210135)

Chromosome 6 - NC_007117.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fc23g05.x1 (e-PCR)
- UniSTS:193164

fa17h08.s1 (e-PCR)
- UniSTS:202422

fc23g05.x1 (e-PCR)
- UniSTS:187843

fk24f06.y1 (e-PCR)
- UniSTS:200687

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables protein phosphatase regulator activity	IBA Inferred from Biological aspect of Ancestor more info
enables protein phosphatase regulator activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
part_of protein phosphatase 4 complex	IBA Inferred from Biological aspect of Ancestor more info
part_of protein phosphatase 4 complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: serine/threonine-protein phosphatase 4 regulatory subunit 2-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001110371.2 → NP_001103841.2 serine/threonine-protein phosphatase 4 regulatory subunit 2-B

Status: VALIDATED

Source sequence(s)

BX119974

UniProtKB/Swiss-Prot

A1L1M4, A8WFX8, Q4V9I7

Related

ENSDARP00000069968.4, ENSDART00000075486.6