phyhiplb phytanoyl-CoA 2-hydroxylase interacting protein-like b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: phyhiplbprovided by ZNC
Official Full Name: phytanoyl-CoA 2-hydroxylase interacting protein-like bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040927-27
See related: Ensembl:ENSDARG00000070498 AllianceGenome:ZFIN:ZDB-GENE-040927-27
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: phyhipl; zgc:100983
Summary: Predicted to be active in cytoplasm. Is expressed in dorsolateral placode; intermediate cell mass of mesoderm; nervous system; and ventral mesoderm. Orthologous to human PHYHIPL (phytanoyl-CoA 2-hydroxylase interacting protein like). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 12

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	12	NC_007123.7 (7445595..7513794)
105	previous assembly	GRCz10 (GCF_000002035.5)	12	NC_007123.6 (7412092..7480310)

Chromosome 12 - NC_007123.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: phytanoyl-CoA hydroxylase-interacting protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001005602.3 → NP_001005602.3 phytanoyl-CoA hydroxylase-interacting protein-like isoform a

Status: VALIDATED

Source sequence(s)

FP102277

UniProtKB/Swiss-Prot

A4QNW7, Q641M5

UniProtKB/TrEMBL

A0A8M2B4A8

Related

ENSDARP00000094312.3, ENSDART00000103536.6
NM_001430908.1 → NP_001417837.1 phytanoyl-CoA hydroxylase-interacting protein-like isoform a

Status: VALIDATED

Source sequence(s)

FP102277

UniProtKB/Swiss-Prot

A4QNW7, Q641M5

UniProtKB/TrEMBL

A0A8M2B4A8
NM_001430909.1 → NP_001417838.1 phytanoyl-CoA hydroxylase-interacting protein-like isoform b

Status: VALIDATED

Source sequence(s)

FP102277

UniProtKB/Swiss-Prot

A4QNW7, Q641M5
NM_001430910.1 → NP_001417839.1 phytanoyl-CoA hydroxylase-interacting protein-like isoform b

Status: VALIDATED

Source sequence(s)

FP102277

UniProtKB/Swiss-Prot

A4QNW7, Q641M5

Related

ENSDARP00000114750.1, ENSDART00000134608.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007123.7 Reference GRCz11 Primary Assembly

Range

7445595..7513794

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021480001.2 → XP_021335676.1 phytanoyl-CoA hydroxylase-interacting protein-like isoform X1

UniProtKB/Swiss-Prot

A4QNW7, Q641M5

UniProtKB/TrEMBL

A0A8M9QII2

Conserved Domains (1) summary

cd00063
Location:39 → 144

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...