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mgarpb mitochondria localized glutamic acid rich protein b [ Danio rerio (zebrafish) ]

Gene ID: 100002387, updated on 9-Dec-2024

Summary

Official Symbol
mgarpbprovided by ZNC
Official Full Name
mitochondria localized glutamic acid rich protein bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-130530-930
See related
AllianceGenome:ZFIN:ZDB-GENE-130530-930
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
mgarp
Summary
Predicted to act upstream of or within anterograde axonal transport. Predicted to be located in mitochondrion. Orthologous to human MGARP (mitochondria localized glutamic acid rich protein). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See mgarpb in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (13997131..14014743, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (13311786..13328423, complement)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137489979 Neighboring gene nocturnin b Neighboring gene E74-like factor 2b (ets domain transcription factor) Neighboring gene histone PARylation factor 1 Neighboring gene ankyrin 2a, neuronal Neighboring gene uncharacterized LOC101887098

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
protein MGARP
Names
mitochondria-localized glutamic acid-rich protein
zmp:0000000927

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    13997131..14014743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003197634.6XP_003197682.1  protein MGARP

    UniProtKB/TrEMBL
    A0A8M1RSA4, A0A8M2B6I0
    Conserved Domains (1) summary
    pfam14962
    Location:1157
    AIF-MLS; Mitochondria Localization Sequence

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394465.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    199725..215137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021471118.2XP_021326793.1  protein MGARP

    UniProtKB/TrEMBL
    A0A8M9P7S5, A0A8M9PIM1
    Conserved Domains (1) summary
    pfam14962
    Location:1157
    AIF-MLS; Mitochondria localization Sequence