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LOC100001665 fibrous sheath CABYR-binding protein [ Danio rerio (zebrafish) ]

Gene ID: 100001665, updated on 3-Dec-2024

Summary

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Gene symbol
LOC100001665
Gene description
fibrous sheath CABYR-binding protein
See related
Ensembl:ENSDARG00000073931
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC100001665 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (10303100..10349091)
105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (10170131..10204343)

Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100538156 Neighboring gene POU class 6 homeobox 2 Neighboring gene OTU deubiquitinase with linear linkage specificity a Neighboring gene si:ch211-69l10.4 Neighboring gene ANKH inorganic pyrophosphate transport regulator a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
fibrous sheath CABYR-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007135.7 Reference GRCz11 Primary Assembly

    Range
    10303100..10349091
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068217163.1 → XP_068073264.1  fibrous sheath CABYR-binding protein isoform X1

    UniProtKB/TrEMBL
    A0A8M1PSJ7, F1QGG2
    Related
    ENSDARP00000102435.3, ENSDART00000112455.4

  2. XM_068217165.1 → XP_068073266.1  fibrous sheath CABYR-binding protein isoform X3

    Related
    ENSDARP00000115397.1, ENSDART00000141718.2

  3. XM_068217164.1 → XP_068073265.1  fibrous sheath CABYR-binding protein isoform X2

  4. XM_001341582.8 → XP_001341618.4  fibrous sheath CABYR-binding protein isoform X1

    UniProtKB/TrEMBL
    A0A8M1PSJ7, F1QGG2
    Conserved Domains (2) summary
    pfam09528
    Location:23 → 476
    Ehrlichia_rpt; Ehrlichia tandem repeat (Ehrlichia_rpt)
    pfam16218
    Location:579 → 843
    Peptidase_C101; Peptidase family C101
Nucleotide Protein Strain
Heading Accession and Version

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