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stard14 START domain containing 14 [ Danio rerio (zebrafish) ]

Gene ID: 100001416, updated on 9-Dec-2024

Summary

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Official Symbol
stard14provided by ZNC
Official Full Name
START domain containing 14provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-963
See related
Ensembl:ENSDARG00000031929 AllianceGenome:ZFIN:ZDB-GENE-040426-963
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:56270; zgc:77753; wu:fc41g06
Summary
Predicted to enable lipid binding activity. Predicted to act upstream of or within lipid transport. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See stard14 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (33270387..33277890, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (32930073..32937765, complement)

Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene glycerophosphodiester phosphodiesterase domain containing 2 Neighboring gene PDZ domain containing 11 Neighboring gene RAB41, member RAS oncogene family Neighboring gene septin 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC56270, MGC77753

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within lipid transport IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
START domain containing 14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200220.1 → NP_956514.1  START domain containing 14

    See identical proteins and their annotated locations for NP_956514.1

    Status: PROVISIONAL

    Source sequence(s)
    BC046038
    UniProtKB/TrEMBL
    Q7ZV19
    Related
    ENSDARP00000048129.5, ENSDART00000048130.7
    Conserved Domains (1) summary
    cd08871
    Location:3 → 234
    START_STARD10-like; Lipid-binding START domain of mammalian STARD10 and related proteins

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007125.7 Reference GRCz11 Primary Assembly

    Range
    33270387..33277890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005173231.4 → XP_005173288.1  START domain containing 14 isoform X1

    See identical proteins and their annotated locations for XP_005173288.1

    UniProtKB/TrEMBL
    B7ZVH2, B7ZVH6
    Related
    ENSDARP00000115487.1, ENSDART00000132850.2
    Conserved Domains (1) summary
    cd08871
    Location:3 → 234
    START_STARD10-like; Lipid-binding START domain of mammalian STARD10 and related proteins

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394917.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    234383..241372 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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