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fhip1aa FHF complex subunit HOOK interacting protein 1Aa [ Danio rerio (zebrafish) ]

Gene ID: 100000787, updated on 9-Dec-2024

Summary

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Official Symbol
fhip1aaprovided by ZNC
Official Full Name
FHF complex subunit HOOK interacting protein 1Aaprovided by ZNC
Primary source
ZFIN:ZDB-GENE-090312-132
See related
Ensembl:ENSDARG00000061021 AllianceGenome:ZFIN:ZDB-GENE-090312-132
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fam160a1; fam160a1a; si:dkey-176m14.1
Summary
Orthologous to human FHIP1A (FHF complex subunit HOOK interacting protein 1A). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
human mouse all
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Genomic context

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See fhip1aa in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (24469402..24515110)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (23778527..23821498)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene quinoid dihydropteridine reductase b, tandem duplicate 3 Neighboring gene SH3 domain containing 19 Neighboring gene glutamyl-tRNA(Gln) amidotransferase, subunit B Neighboring gene dCTP pyrophosphatase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein FAM160A1; FHF complex subunit HOOK-interacting protein 1A
Names
family with sequence similarity 160 member A1a
family with sequence similarity 160, member A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    24469402..24515110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009291266.4 → XP_009289541.1  FHF complex subunit HOOK-interacting protein 1A

    See identical proteins and their annotated locations for XP_009289541.1

    UniProtKB/TrEMBL
    A0A286YBG1, A0A8M3APE5
    Related
    ENSDARP00000144314.2, ENSDART00000176581.2
    Conserved Domains (1) summary
    pfam10257
    Location:106 → 433
    RAI16-like; Retinoic acid induced 16-like protein

  2. XM_009291274.4 → XP_009289549.1  FHF complex subunit HOOK-interacting protein 1A

    See identical proteins and their annotated locations for XP_009289549.1

    UniProtKB/TrEMBL
    A0A286YBG1, A0A8M3APE5
    Related
    ENSDARP00000135353.1, ENSDART00000163140.2
    Conserved Domains (1) summary
    pfam10257
    Location:106 → 433
    RAI16-like; Retinoic acid induced 16-like protein

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395216.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    177762..221298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021473904.2 → XP_021329579.1  FHF complex subunit HOOK-interacting protein 1A

    UniProtKB/TrEMBL
    A0A8M9PRC5
    Conserved Domains (1) summary
    pfam10257
    Location:106 → 433
    RAI16-like; Retinoic acid induced 16-like protein

  2. XM_021473903.2 → XP_021329578.1  FHF complex subunit HOOK-interacting protein 1A

    UniProtKB/TrEMBL
    A0A8M9PRC5
    Conserved Domains (1) summary
    pfam10257
    Location:106 → 433
    RAI16-like; Retinoic acid induced 16-like protein
Nucleotide Protein
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