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si:zfos-411a11.2 si:zfos-411a11.2 [ Danio rerio (zebrafish) ]

Gene ID: 100000156, updated on 4-Jan-2025

Summary

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Official Symbol
si:zfos-411a11.2provided by ZNC
Official Full Name
si:zfos-411a11.2provided by ZNC
Primary source
ZFIN:ZDB-GENE-131119-33
See related
AllianceGenome:ZFIN:ZDB-GENE-131119-33
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable aromatase activity; heme binding activity; and iron ion binding activity. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See si:zfos-411a11.2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (15757..20730, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (87950..93513, complement)

Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 2, subfamily Y, polypeptide 3 Neighboring gene si:ch1073-83n3.2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Metabolic disruption of zebrafish (Danio rerio) embryos by bisphenol A. An integrated metabolomic and transcriptomic approach. Ortiz-Villanueva E, et al. Environ Pollut, 2017 Dec. PMID 28780062
  2. Regulation of posterior body and epidermal morphogenesis in zebrafish by localized Yap1 and Wwtr1. Kimelman D, et al. Elife, 2017 Dec 28. PMID 29283341, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables aromatase activity IEA
Inferred from Electronic Annotation
more info
  
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
cytochrome P450 2G1
Names
zmp:0000000718

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007126.7 Reference GRCz11 Primary Assembly

    Range
    15757..20730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017351113.3 → XP_017206602.1  cytochrome P450 2G1

    UniProtKB/TrEMBL
    A0A8M6YUY2
    Conserved Domains (1) summary
    pfam00067
    Location:40 → 487
    p450; Cytochrome P450
Nucleotide Protein Strain
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