GEO DataSets

(Submitter supplied) During the over 300 million years of co-evolution between herbivorous insects and their host plants, a dynamic equilibrium of evolutionary arms race has been established. However, the co-adaptation between insects and their host plants is a complex process, often driven by multiple evolutionary mechanisms. We found that various lepidopteran pests that use maize as a host exhibit differential adaptation to the plant secondary metabolites, benzoxazinoids (BXs). more...

Organism:

Spodoptera frugiperda

Type:

Expression profiling by high throughput sequencing

Platform:

GPL29193

6 Samples

Download data: TXT

(Submitter supplied) In this study, NanoString technology gene expression quantification platform was used to study the expression of toxin genes causing infections from Bacteria (Photorhabdus and Xenorhabdus), Nematode (H.indica, S.riobrave , S.carpocapsae) specific genes for detection and Immune related genes from the infected insects (Spodoptera frugiperda and Galleria mellonella). The study revealed the expression of different immune related genes from the infected insects (Spodoptera frugiperda and Galleria mellonella) and helped in understanding the trend of expression of gene in the samples from the healthy condition to the death stage. more...

Organism:

Xenorhabdus; Photorhabdus; Spodoptera frugiperda; Galleria mellonella; Drosophila melanogaster; Bombyx mori; Heterorhabditis bacteriophora

Type:

Expression profiling by array

Platform:

GPL32011

10 Samples

Download data: RCC, TXT

(Submitter supplied) The proton-activated chloride (PAC) channel (also known as acid-sensitive outwardly rectifying anion channel, ASOR) plays a critical role in acid-induced cell death and endocytosis. However, little is known about the regulatory factors and binding partners of PAC. In this study, we discovered that transfer RNA (tRNA) interacts directly with PAC as an unexpected binding partner. Using cryo-electron microscopy, we determined that two PAC trimers and one co-purified tRNA molecule form a stable complex via a highly conserved KR motif, representing the closed conformation. more...

Organism:

Homo sapiens; Spodoptera frugiperda

Type:

Other

Platforms:

GPL18573 GPL27985

2 Samples

Download data: TXT

(Submitter supplied) We measued IgG autoantibodies associated with Connective Tissue Diseases (CTDs) and Anti-Cytokine Antibodies (ACA) in SLE and healthy controls who received the BNT162b2 vaccine.

Organism:

Escherichia coli; Spodoptera frugiperda; Bos taurus; Homo sapiens; Sus scrofa; Triticum aestivum; Capra hircus

Type:

Protein profiling by protein array

Platform:

GPL34257

102 Samples

Download data: TXT, XLSX

(Submitter supplied) MicroRNAs (miRNAs) are endogenous small noncoding RNAs (18–25 nt) that are involved in many physiological processes including development, cancer, immunity, apoptosis and host-microbe interactions through posttranscriptional regulation of gene expression. In this study, we measured the profile of small RNAs over the developmental transitions of Spodoptera frugiperda from egg to adult. We identified 741 miRNAs, including 493 known and 248 novel miRNAs. more...

Organism:

Spodoptera frugiperda

Type:

Non-coding RNA profiling by high throughput sequencing

Platform:

GPL25030

18 Samples

Download data: XLS

(Submitter supplied) RNA-guided endonucleases form the crux of diverse biological processes and technologies, including adaptive immunity, transposition, and genome editing. Some of these enzymes are components of insertion sequences (IS) in the IS200/IS605 and IS607 transposon families. Both IS families encode a TnpA transposase and TnpB nuclease, an RNA-guided enzyme ancestral to CRISPR-Cas12. In eukaryotes and their viruses, TnpB homologs occur as two distinct types, Fanzor1 and Fanzor2. more...

Organism:

Escherichia coli; Spodoptera frugiperda

Type:

Non-coding RNA profiling by high throughput sequencing

Platforms:

GPL33862 GPL16085

6 Samples

Download data: BW, FASTA

(Submitter supplied) The fall armyworm (FAW) Spodoptera frugiperda is one of the most severe economic pests of multiple crops globally. Control of this pest is often achieved using insecticides; however, over time, S. frugiperda has developed resistance to new mode of action compounds, including diamides. Previous studies have indicated diamide resistance is a complex developmental process involving multiple detoxification genes. more...

Organism:

Spodoptera frugiperda

Type:

Non-coding RNA profiling by high throughput sequencing

Platform:

GPL33457

6 Samples

Download data: XLSX

(Submitter supplied)  In order to clarify the molecular mechanism of metabolic detoxification in Spodoptera frugiperda, the enzyme activity assay and transcriptome sequencing analysis were used to screen and identify the relevant genes related to metabolic detoxification after induced by insecticides at LC50 dose.

Organism:

Spodoptera frugiperda

Type:

Expression profiling by high throughput sequencing

Platform:

GPL29193

15 Samples

Download data: TXT

(Submitter supplied) Verson’s glands are segmental pairs of dermal glands attached to the epidermis in lepidopteran larvae. They produce macromolecules during intermolt period and empty them during each molt. Morphological, histochemical, developmental, and protein analysis studies have been conducted to determine the functions of Verson’s glands. However, the exact role of Verson’s glands remains unclear. In our previous study, a strain of transgenic fall armyworm, Spdoptera frugiperda expressing green fluorescence protein (GFP) and Systemic RNA interference defective protein 1 (SID-1) from Caenorhabditis elegans was established to improve RNA interference (RNAi) efficiency. more...

Organism:

Spodoptera frugiperda

Type:

Expression profiling by high throughput sequencing

Platform:

GPL32951

3 Samples

Download data: TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Escherichia coli; Triticum aestivum; Spodoptera frugiperda; Bos taurus; Capra hircus; Homo sapiens; Sus scrofa

Type:

Protein profiling by protein array

Platforms:

GPL33017 GPL33018

710 Samples

Download data

(Submitter supplied) We used protein arrays to measure IgG autoantibodies associated with Connective Tissue Diseases (CTDs) and Anti-Cytokine Antibodies (ACA) in patients with non-COVID-19 infections such as influenza

Organism:

Homo sapiens; Escherichia coli; Triticum aestivum; Spodoptera frugiperda; Bos taurus; Capra hircus; Sus scrofa

Type:

Protein profiling by protein array

Platform:

GPL33018

355 Samples

Download data: XLSX

(Submitter supplied) N6-methyladenosine RNA (m6A) is the most abundant modification of messenger RNA (mRNA), which has been demonstrated in regulating various post-transcriptional processes and playing key roles in sex determination, neuronal functions, and embryonic development in Drosophila and mice. However, the methylation profile and relevant functions in other insects remain largely unknown. Here, we analyzed transcriptome-wide profile of m6A modification in the embryonic development of a destructive agricultural pest Spodoptera frugiperda. more...

Organism:

Spodoptera frugiperda

Type:

Expression profiling by high throughput sequencing

Platform:

GPL29193

12 Samples

Download data: BED

(Submitter supplied) Spodoptera frugiperda is the world’s major agricultural pests, and has the distinctive features of high fecundity, strong migratory capacity and high resistance to most insecticides. At present, the control of S. frugiperda in China relies mainly on the spraying of chemical insecticides. MicroRNAs (miRNAs) are a class of small, single-stranded, non-coding RNAs, and play crucial regulatory roles in various physiological processes, including the insecticide resistance in insects. more...

Organism:

Spodoptera frugiperda

Type:

Non-coding RNA profiling by high throughput sequencing

Platform:

GPL25030

15 Samples

Download data: XLSX

(Submitter supplied) We used RNA-Sequencing technology to analyze the transcriptomes of two ascovirus isolates, SfAV and TnAV, over three weeks.

Organism:

Spodoptera frugiperda; Trichoplusia ni

Type:

Expression profiling by high throughput sequencing

Platforms:

GPL27985 GPL30114

48 Samples

Download data: XLSX

(Submitter supplied) Insect gut microbiota plays important roles in acquiring nutrition, preventing pathogens infection, immune responses, and communicating with the environment. Gut microbiota can be affected by some external factors such as foods, temperature, and antibiotics. Spodoptera frugiperda (Lepidoptera: Noctuidae) is an important destructive pest of grain crops all over the world. The function of gut microbiota in S. more...

Organism:

Spodoptera frugiperda; insect gut metagenome

Type:

Expression profiling by high throughput sequencing; Other

Platforms:

GPL30191 GPL29193

12 Samples

Download data: FA, TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Homo sapiens; Sus scrofa; Cricetulus griseus; synthetic construct; Escherichia coli; Spodoptera frugiperda; Bos taurus; Capra aegagrus; Triticum aestivum

Type:

Protein profiling by protein array

4 related Platforms

598 Samples

Download data: XLSX

(Submitter supplied) We developed three different protein arrays to measure IgG autoantibodies associated with Connective Tissue Diseases (CTDs), Anti-Cytokine Antibodies (ACA), and anti-viral antibody responses in 147 hospitalized COVID-19 patients in three different centers.

Organism:

Escherichia coli; Spodoptera frugiperda; Bos taurus; synthetic construct; Sus scrofa; Capra aegagrus; Cricetulus griseus; Homo sapiens; Triticum aestivum

Type:

Protein profiling by protein array

Platform:

GPL30433

111 Samples

Download data: XLSX

(Submitter supplied) We developed three different protein arrays to measure IgG autoantibodies associated with Connective Tissue Diseases (CTDs), Anti-Cytokine Antibodies (ACA), and anti-viral antibody responses in 147 hospitalized COVID-19 patients in three different centers.

Organism:

Homo sapiens; Sus scrofa; Capra aegagrus; Cricetulus griseus; Escherichia coli; Triticum aestivum; Spodoptera frugiperda; Bos taurus

Type:

Protein profiling by protein array

Platform:

GPL30432

89 Samples

Download data: XLSX

(Submitter supplied) We developed three different protein arrays to measure IgG autoantibodies associated with Connective Tissue Diseases (CTDs), Anti-Cytokine Antibodies (ACA), and anti-viral antibody responses in 147 hospitalized COVID-19 patients in three different centers.

Organism:

Triticum aestivum; Spodoptera frugiperda; Bos taurus; Homo sapiens; Sus scrofa; Capra aegagrus; Cricetulus griseus; Escherichia coli

Type:

Protein profiling by protein array

Platform:

GPL30432

121 Samples

Download data: XLSX

(Submitter supplied) We developed three different protein arrays to measure IgG autoantibodies associated with Connective Tissue Diseases (CTDs), Anti-Cytokine Antibodies (ACA), and anti-viral antibody responses in 147 hospitalized COVID-19 patients in three different centers.

Organism:

Homo sapiens; Sus scrofa; Bos taurus; Capra aegagrus; Triticum aestivum; Cricetulus griseus; Escherichia coli; Spodoptera frugiperda

Type:

Protein profiling by protein array

Platform:

GPL30431

90 Samples

Download data: XLSX