GEO DataSets

(Submitter supplied) Transcriptional profiling of marine ammonia oxidizing archaea Nitrosopumilus maritimus cells comparing exponential phase control cells with cells under 24 hours starvation and with cells under recovery after 24 hours starvation. Goal was to determine the effects of global transcriptional responses of N. maritimus cells under ammonia starvation and recovery conditions.

Organism:

Nitrosopumilus maritimus SCM1

Type:

Expression profiling by array

Platform:

GPL24013

8 Samples

Download data: PAIR, TXT

(Submitter supplied) We used transcription analyses to explore the whole cellular response of Nitrosopumilus maritimus strain SCM1 to varying copper concentrations, and relate those patterns to its global proteome.

Organism:

Nitrosopumilus maritimus SCM1

Type:

Expression profiling by high throughput sequencing

Platform:

GPL24002

7 Samples

Download data: TXT

(Submitter supplied) NimbleGen custom design 090209_N_maritimus_SCM1_expr_X4; 4x72K probes; design ID 9157; 4-plex expression for Nitrosopumilus maritimus SCM1 (genome.ornl.gov/microbial/nmar/02jul07), 1799 gene models, 12mer freq filtering, 13 probes each per 1794 target seqs), three copies of each on array. Protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.

Organism:

Nitrosopumilus maritimus SCM1

1 Series

8 Samples

Download data: NDF, NGD