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Items: 1 to 20 of 107

1.

Dose-responsive microRNA profiles in mahi-mahi (Coryphaena hippurus) larvae exposed to Deepwater Horizon oil

(Submitter supplied) Purpose: To help identify molecular regulatory mechanisms of developmental toxicity for fish exposed to Deepwater Horizon (DWH) oil, microRNA profiles in mahi-mahi (Coryphaena hippurus) larvae exposed to different DWH oils (source/mass and artificially weathered oil) were evaluated using High Throughput Sequencing (HTS). Methods: Total microRNA profiles of 48 hpf mahi-mah larvae after slick (0.5%, 1%, and 2%) and source/mass oil (0.125%, 0.25% and 5%) exposure were generated by deep sequencing, in triplicate, using Illumina NextSEQ v2. more...
Organism:
Coryphaena hippurus
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL23946
21 Samples
Download data: XLS, XLSX
Series
Accession:
GSE116711
ID:
200116711

SRA Run Selector

2.

Dose-responsive transcriptomic profiles in mahi-mahi (Coryphaena hippurus) larvae exposed to Deepwater Horizon oil (mRNA profiles)

(Submitter supplied) Purpose:To help identify molecular mechanisms and pathways potentially involved in the developmental toxicity for fish exposed to different concentrations of Deepwater Horizon (DWH) oil, transcriptomic profiles in mahi-mahi (Coryphaena hippurus) embryos exposed to different DWH oils (source and artificially weathered oil) were evaluated using High Throughput Sequencing (HTS). Methods:Total mRNA profiles of 48 hpf mahi-mah larvae after slick (0.5%, 1%, and 2%) and source/mass oil (0.125%, 0.25% and 5%) exposure were generated by deep sequencing, in triplicate, using Illumina NextSEQ v2. more...
Organism:
Coryphaena hippurus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL23946
21 Samples
Download data: TXT, XLSX
Series
Accession:
GSE116639
ID:
200116639

SRA Run Selector

3.

Regulation of microRNAs in response to Deepwater Horizon oil in mahi-mahi (Coryphaena hippurus) embryos at 3 different stages.

(Submitter supplied) Purpose:To help identify the role miRNAs in molecular mechanisms and pathways potentially involved in the developmental toxicity for fish exposed to Deepwater Horizon (DWH) oil, miRNA-mRNA networks in mahi-mahi (Coryphaena hippurus) embryos exposed to different DWH oils (source and artificially weathered oil) were evaluated at different critical windows of development using High Throughput Sequencing (HTS). more...
Organism:
Coryphaena hippurus
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL23946
27 Samples
Download data: TXT
Series
Accession:
GSE102966
ID:
200102966

SRA Run Selector

4.

Transcriptomic responses to Deepwater Horizon oil in mahi-mahi (Coryphaena hippurus) embryos reveals time and oil-dependent linkages between molecular initiating events and developmental toxicity

(Submitter supplied) Purpose:To help identify molecular mechanisms and pathways potentially involved in the developmental toxicity for fish exposed to Deepwater Horizon (DWH) oil, transcriptomic profiles in mahi-mahi (Coryphaena hippurus) embryos exposed to different DWH oils (source and artificially weathered oil) were evaluated at different critical windows of development using High Throughput Sequencing (HTS). Methods:Total mRNA profiles of 24, 48, 96 hpf mahi-mahi larvae after slick and source oil exposure were generated by deep sequencing, in triplicate, using Illumina HiSeq2500. more...
Organism:
Coryphaena hippurus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21662
32 Samples
Download data: TXT
Series
Accession:
GSE79675
ID:
200079675

PubMed Similar studies SRA Run Selector

5.

Illumina NextSeq 500 (Coryphaena hippurus)

Organism:
Coryphaena hippurus
3 Series
69 Samples
Download data
Platform
Accession:
GPL23946
ID:
100023946

6.

Illumina HiSeq 2500 (Coryphaena hippurus)

Organism:
Coryphaena hippurus
1 Series
32 Samples
Download data
Platform
Accession:
GPL21662
ID:
100021662

7.

mass_H3 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259245
ID:
303259245

SRA Run Selector

8.

mass_H2 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259244
ID:
303259244

SRA Run Selector

9.

mass_H1 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259243
ID:
303259243

SRA Run Selector

10.

mass_M3 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259242
ID:
303259242

SRA Run Selector

11.

mass_M2 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259241
ID:
303259241

SRA Run Selector

12.

mass_M1 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259240
ID:
303259240

SRA Run Selector

13.

mass_L3 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259239
ID:
303259239

SRA Run Selector

14.

mass_L2 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259238
ID:
303259238

SRA Run Selector

15.

mass_L1 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259237
ID:
303259237

SRA Run Selector

16.

slick_H3 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259236
ID:
303259236

SRA Run Selector

17.

slick_H2 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259235
ID:
303259235

SRA Run Selector

18.

slick_H1 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259234
ID:
303259234

SRA Run Selector

19.

slick_M3 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259233
ID:
303259233

SRA Run Selector

20.

slick_M2 miRNA seq

Organism:
Coryphaena hippurus
Source name:
whole embryo
Platform:
GPL23946
Series:
GSE116711
Download data
Sample
Accession:
GSM3259232
ID:
303259232

SRA Run Selector

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