GEO DataSets

(Submitter supplied) A cyanobacterium, Thermosynechococcus elongatus BP1, was cultured with a heterotroph, Meiothermus ruber strain A, under a variety of conditions. A gene co-expression approach was used to infer a network of T. elongatus and M. ruber genes, with a focus on those genes from different species that were co-expressed, highlighting potential points of coordination and interaction.

Organism:

Thermosynechococcus vestitus BP-1; Meiothermus ruber

Type:

Expression profiling by high throughput sequencing

Platform:

GPL22951

20 Samples

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(Submitter supplied) The transcriptional response of the cyanobacteria T. elongatus to co-cultiavation with a heterotrophic partner M. ruber was examined under three varying light levels and three varying oxygen levels.

Organism:

Thermosynechococcus vestitus BP-1

Type:

Expression profiling by high throughput sequencing

Platform:

GPL22996

20 Samples

Download data: CSV

(Submitter supplied) The transcriptional response of the cyanobacteria T. elongatus to co-cultiavation with a heterotrophic partner M. ruber was examined under three varying light levels and three varying oxygen levels.

Organism:

Meiothermus ruber; Thermosynechococcus vestitus BP-1

Type:

Expression profiling by high throughput sequencing

Platform:

GPL22951

12 Samples

Download data: CSV

(Submitter supplied) To investigate the temperature response in Thermosynechococcus elongatus (BP-1) and look for coordinated control in the cell, transcriptomes of BP-1 were measured using RNAseq following exposure to low and high temperature stress. The amount of temperature increase (53 to 61 °C) and decrease (53 to 45 °C) was based on the allowable range of continuous growth. The cells were growth in three separate culture tubes under LED light in a temperature-controlled submersible chamber under batch growth conditions. more...

Organism:

Thermosynechococcus vestitus BP-1

Type:

Expression profiling by high throughput sequencing

Platform:

GPL20600

39 Samples

Download data: TXT

(Submitter supplied) Microarrays were hybridized with a mixture of solutions containing LL2 cDNA labeled with Cy3 or Cy5 (dye-swap) and LL14 cDNA labeled with Cy5 or Cy3 (dye-swap). Keywords: repeat sample

Organism:

Thermosynechococcus vestitus BP-1

Type:

Expression profiling by array

Platform:

GPL1771

4 Samples

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(Submitter supplied) Microarray using 45-mer unmodified oligonucleotide that contains 2,397 genes (95%) of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1. Keywords = thermophilic cyanobacteria Keywords = unmodified oligonucleotide

Organism:

Thermosynechococcus vestitus BP-1

1 Series

4 Samples

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