GEO DataSet Links for PMC (Select 8397710) - GEO DataSets

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Items: 3

Select item 2001312291.

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and non-antibiotic pharmaceuticals stressed E. coli K-12 LE392, P. putida KT2440, and RP4 plasmid Transcriptomes

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Pseudomonas putida KT2440; Plasmid RP4; Escherichia coli K-12

Type:: Expression profiling by high throughput sequencing

Platform:: GPL26609
30 Samples

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Series

Accession:: GSE131229

ID:: 200131229

PubMed Full text in PMC Similar studies

Select item 2001312282.

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and non-antibiotic pharmaceuticals stressed E. coli K-12 LE392, P. putida KT2440, and RP4 plasmid Transcriptomes [experiment 2]

(Submitter supplied) The goals of this study are to use Next-generation sequencing (NGS) to detect bacterial mRNA profiles of E. coli K-12 LE392, P. putida KT2440 and IncPα RP4 plasmid, and their mRNA response under the exposure of CuO NPs and Cu2+. The concentrations were 5 μmol/L for CuO NPs and Cu2+. The group without dosing CuO NPs or Cu2+ was the control group. Each concentration was conducted in triplicate. By comparing the mRNA profiles of experimental groups and control group, the effects of these CuO NPs and Cu2+ on transcriptional levels can be revealed. more...

Organism:: Pseudomonas putida KT2440; Plasmid RP4; Escherichia coli K-12

Type:: Expression profiling by high throughput sequencing

Platform:: GPL26609
9 Samples

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Series

Accession:: GSE131228

ID:: 200131228

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001305623.

(Submitter supplied) The goals of this study are to use Next-generation sequencing (NGS) to detect bacterial mRNA profiles of wild-type E. coli K-12 LE392, P. putida KT2440 and IncPα RP4 plasmid, and their mRNA response under the exposure of six non-antibiotic pharmaceuticals, including ibuprofen, naproxen, gemfibrozil, diclofenac, propanolol, and iopromide. The concentrations were 0.5 mg/L for ibuprofen, naproxen, gemfibrozil, diclofenac, propanolol, and 1.0 mg/L for iopromide. more...