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Links from GEO DataSets

Items: 9

1.
Full record GDS3140

Lithium-induced lifespan extension model

Analysis of Caenorhabditis elegans worms 48 hours following treatment with lithium. Chronic lithium treatment increased the lifespan of this organism. Results provide insight into the molecular basis of lithium’s effect on lifespan.
Organism:
Caenorhabditis elegans
Type:
Expression profiling by array, log ratio, 2 agent sets
Platform:
GPL5367
Series:
GSE8058
12 Samples
Download data: GPR
2.

Wildtype (N2) C. elegans: Control vs. 10mM LiCl treated for 48hr at 25oC

(Submitter supplied) Transcriptional profiling of adult C. elegans comparing control untreated with populations exposed to 10mM LiCl. Populations treated from larval stage L4 for 48hr at 25oC. 10mM LiCl contained in the Nematode Growth Media (NGM) Keywords: Drug treatment
Organism:
Caenorhabditis elegans
Type:
Expression profiling by array
Dataset:
GDS3140
Platform:
GPL5367
12 Samples
Download data: GPR
Series
Accession:
GSE8058
ID:
200008058
3.

Deep sequencing of endogenous mRNA from Caenorhabditis elegans in the presence of 2-deoxy-D-glucose (DOG) at 4 different time points

(Submitter supplied) Background: C. elegans fed with a chemical inhibitor of glucose, namely 2-deoxy-D-glucose (DOG), exhibit considerably extended life span. DOG, in contradiction to D-glucose, cannot be metabolized in the glycolytic pathway. This results in the fact that less glucose is available for ATP production, and thus makes DOG-feeding of the roundworms equivalent to glucose restriction. The RNA-seq data comprises 4 age groups (1, 5, 10 and 20 days after L4) Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Caenorhabditis elegans
Type:
Expression profiling by high throughput sequencing
Platform:
GPL13657
11 Samples
Download data: TXT
Series
Accession:
GSE46344
ID:
200046344
4.

daf-16/FoxO isoform-specific deletion mutants

(Submitter supplied) FoxO transcription factors promote longevity across taxa. How they do so is poorly understood. In the nematode Caenorhabditis elegans, the A- and F-isoforms of the FoxO transcription factor DAF-16 extend life span in the context of reduced DAF-2 insulin-like growth factor receptor (IGFR) signaling. To elucidate the mechanistic basis for DAF-16/FoxO-dependent life span extension, we performed an integrative analysis of isoform-specific daf-16/FoxO mutants. more...
Organism:
Caenorhabditis elegans
Type:
Expression profiling by high throughput sequencing
Platform:
GPL13657
21 Samples
Download data: TXT
Series
Accession:
GSE72426
ID:
200072426
5.

Transcriptional outputs of the Caenorhabditis elegans forkhead protein DAF-16

(Submitter supplied) To identify DAF-16-dependent transcriptional alterations that occur in a long-lived C. elegans strain, we used cDNA microarrays and genomic analysis to identify putative direct and indirect DAF-16 transcriptional target genes. Set of arrays organized by shared biological context, such as organism, tumors types, processes, etc. Keywords: Logical Set
Organism:
Caenorhabditis elegans
Type:
Expression profiling by array
Platform:
GPL2653
4 Samples
Download data
Series
Accession:
GSE3089
ID:
200003089
6.

The C. elegans ortholog of human selenium binding protein 1 is a pro-aging factor protecting against selenite toxicity

(Submitter supplied) Y37A1B.5, a SELENBP1 ortholog in C. elegans modulates lifespan and stress resistance. Hence transcriptome profiling (RNA-seq) after depletion of Y37A1B.5 via RNAi was performed, aiming to identify targets that would explain these effects.
Organism:
Caenorhabditis elegans
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18245
6 Samples
Download data: CSV
Series
Accession:
GSE134196
ID:
200134196
7.

Aging time course

(Submitter supplied) Transcriptional Profile of Aging in C. elegans Whole-genome analysis of gene expression during chronological aging of the worm provides a rich database of age-specific changes in gene expression and represents one way to distinguish among these models. Using a rigorous statistical model with multiple replicates, we find that a relatively small number of genes (only 164) show statistically significant changes in transcript levels as aging occurs (<1% of the genome). more...
Organism:
Caenorhabditis elegans
Type:
Expression profiling by array
5 related Platforms
26 Samples
Download data
Series
Accession:
GSE4005
ID:
200004005
8.

mrps-5 RNAi C. elegans expression profiling

(Submitter supplied) Gene expression analysis of Caenorhabditis elegans treated with siRNA of mitochondrial ribosomal protein-5, mrps-5
Organism:
Caenorhabditis elegans
Type:
Expression profiling by array
Platform:
GPL21109
8 Samples
Download data: TXT, XLSX
Series
Accession:
GSE117581
ID:
200117581
9.

In vivo gene expression analysis of C elegans in response to rifampicin

(Submitter supplied) We have discovered rifampicin as a glycation inhibitor, which increases life span in C elegans. In order to understand the mechanism of rifampicin action, microarray analysis was performed to study the changes in gene expression brought about by the drug.
Organism:
Caenorhabditis elegans
Type:
Expression profiling by array
Platform:
GPL200
4 Samples
Download data: CEL
Series
Accession:
GSE45292
ID:
200045292
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