GEO DataSets

(Submitter supplied) Tubers are vegetative reproduction organs formed from underground extensions of the plant stem. Potato tubers are harvested and stored for months. Storage under cold temperatures of 2 - 4 °C is advantageous for supressing sprouting and diseases. However, development of reducing sugars can occur with cold storage through a process called cold-induced sweetening (CIS). CIS is undesirable as it leads to darkened color with fry processing. more...

Organism:

Solanum tuberosum

Type:

Expression profiling by high throughput sequencing

Platform:

GPL16436

60 Samples

Download data: DIFF

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Solanum tuberosum

Type:

Expression profiling by high throughput sequencing

Platform:

GPL22257

34 Samples

Download data

(Submitter supplied) Commercial storage of potatoes often relies on the use of sprout inhibitors to prolong storage and reduce spoilage. The compound 1,4-dimethylnaphthalene (DMN) has seen increase application as a sprout inhibitor in the potato industry as older chemistries are being phased out. The mode of action of DMN is poorly understood as is the sensitivity of potato tissues to this new class of inhibitor. During storage potato tubers transition from a state of endo-dormant to eco-dormant and it is not known if the DMN response is consistent across this developmental transition. more...

Organism:

Solanum tuberosum

Type:

Expression profiling by high throughput sequencing

Platform:

GPL22257

10 Samples

Download data: FPKM_TRACKING

(Submitter supplied) Commercial storage of potatoes often relies on the use of sprout inhibitors to prolong storage and reduce spoilage. The compound 1,4-dimethylnaphthalene (DMN) has seen increase application as a sprout inhibitor in the potato industry as older chemistries are being phased out. The mode of action of DMN is poorly understood as is the sensitivity of potato tissues to this new class of inhibitor. During storage potato tubers transition from a state of endo-dormant to eco-dormant and it is not known if the DMN response is consistent across this developmental transition. more...

Organism:

Solanum tuberosum

Type:

Expression profiling by high throughput sequencing

Platform:

GPL22257

24 Samples

Download data: FPKM_TRACKING

(Submitter supplied) For the first time, we report differentially expressed genes (DEGs) and differentially expressed proteins (DEPs) in potato (Solanum tuberosum L.) tubers characterized by light and dark chip color after cold storage. Two potato diploid progenies derived from reciprocal crosses of parental clones possessing the T- and D-type cytoplasm were used. We recognized 48 and 15 DEGs as compared to RNA-seq data of contrasting segregants. more...

Organism:

Solanum tuberosum

Type:

Expression profiling by high throughput sequencing

Platform:

GPL28958

12 Samples

Download data: XLSX