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Links from GEO DataSets

Items: 20

1.

The effect pregnane receptor X (PXR) agonist PCN on hepatic gene expression in mouse liver with and without glucose

(Submitter supplied) The mice were treated i.p. with pregnenolone-16-α-carbonitrile (PCN, 50mg/kg dissolved in DMSO-corn oil 1:3) or vehicle (DMSO-corn oil 1:3) once daily for four days. The mice were fasted for four hours and then administered glucose (2g/kg) by oral gavage or further kept on fasting. The mice were sacrificed 1 hour after glucose administration.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL21278
12 Samples
Download data: TXT
Series
Accession:
GSE125695
ID:
200125695
2.

The effect of PCN on gene expression in mouse primary hepatocytes

(Submitter supplied) The effect of prototypical pregnane receptor X (PXR) agonist (pregnenolone 16α-carbonitrile) PCN on hepatic gene expression was studied in mice primary hepatocytes.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL9746
2 Samples
Download data: CEL
Series
Accession:
GSE106293
ID:
200106293
3.

RNA-Seq Profiling of Pharmacological Activation of PXR and CAR Mice

(Submitter supplied) This study aimed to quantify and compare the mRNA abundance of major xenobiotic processing genes in liver following activation of PXR and CAR using RNA-Seq
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL13112
9 Samples
Download data: ZIP
Series
Accession:
GSE104734
ID:
200104734
4.

Comparison of target genes from the pregnane X receptor (Pxr) in the liver vs the intestine [colon]

(Submitter supplied) We performed a transcriptomic comparison of the Pxr-regulated genes in the liver and intestine (ileum and colon) using microarrays in adult wild-type (WT) vs Pxr-/- C57Bl6/J male mice treated with the rodent specific Pxr ligand pregnenolone 16α-carbonitrile (PCN) (100 mg/kg i.p. once daily for 4 days).
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL21163
17 Samples
Download data: TXT
Series
Accession:
GSE123963
ID:
200123963
5.

Comparison of target genes from the pregnane X receptor (Pxr) in the liver vs the intestine

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL21163
63 Samples
Download data: TXT
Series
Accession:
GSE123804
ID:
200123804
6.

Comparison of target genes from the pregnane X receptor (Pxr) in the liver vs the intestine [ileum]

(Submitter supplied) We performed a transcriptomic comparison of the Pxr-regulated genes in the liver and intestine (ileum and colon) using microarrays in adult wild-type (WT) vs Pxr-/- C57Bl6/J male mice treated with the rodent specific Pxr ligand pregnenolone 16α-carbonitrile (PCN) (100 mg/kg i.p. once daily for 4 days).
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL21163
23 Samples
Download data: TXT
Series
Accession:
GSE123803
ID:
200123803
7.

Comparison of target genes from the pregnane X receptor (Pxr) in the liver vs the intestine [liver]

(Submitter supplied) We performed a transcriptomic comparison of the Pxr-regulated genes in the liver and intestine (ileum and colon) using microarrays in adult wild-type (WT) vs Pxr-/- C57Bl6/J male mice treated with the rodent specific Pxr ligand pregnenolone 16α-carbonitrile (PCN) (100 mg/kg i.p. once daily for 4 days).
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL21163
23 Samples
Download data: TXT
Series
Accession:
GSE123802
ID:
200123802
8.

Hepatic transcriptome of rats treated with vehicle or fipronil (3 mg/kg/d per os for 14 days)

(Submitter supplied) Fipronil (CAS #: 120068-37-3), a widely used insecticide, has been described as a thyroid disruptor in rat inducing a marked increase in thyroxine (T4) clearance resulting in a decrease in T4 plasma concentration. These effects seem to require the bioactivation of fipronil via its biotransformation into fipronil sulfone by cytochromes P450 (CYP). Here, we hypothesized that fipronil-induced thyroid disruption may, at least in part, result from the induction of hepatic enzymes involved in the metabolism of thyroid hormones. more...
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platform:
GPL7294
15 Samples
Download data: TXT
Series
Accession:
GSE39378
ID:
200039378
9.

Genome wide comparison of the inducible transcriptomes of CAR, PXR and PPARα in primary human hepatocytes

(Submitter supplied) To identify the CAR-, PXR- and PPARα-specific genome-wide expression changes, hepatocyte cultures from six individual donors were treated with the prototypical ligands for CAR (CITCO), PXR (rifampicin) and PPARα (WY14,643) as well as DMSO (vehicle control). Afterwards, the mRNA expression in these samples was determined utilizing Affymetrix® microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL6244
24 Samples
Download data: CEL
Series
Accession:
GSE76148
ID:
200076148
10.

Transcriptomic effect of high-fat diet and PCN treatment on the gonadal white adipose tissue of C57BL/6N mice.

(Submitter supplied) C57BL/7N mice were fed high-fat diet (HFD) and treated with Pregnenolone-16alfa-carbonitrile (PCN), a selective murine PXR agonist, and duodenal effects of the high-fat diet feeding and PCN treatment were studied.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21626
12 Samples
Download data: TXT
Series
Accession:
GSE168197
ID:
200168197
11.

Transcriptomic effect of high-fat diet and PCN treatment on the skeletal muscle of C57BL/6N mice.

(Submitter supplied) C57BL/7N mice were fed high-fat diet (HFD) and treated with Pregnenolone-16alfa-carbonitrile (PCN), a selective murine PXR agonist, and duodenal effects of the high-fat diet feeding and PCN treatment were studied.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21626
12 Samples
Download data: TXT
Series
Accession:
GSE168196
ID:
200168196
12.

Transcriptomic effect of high-fat diet and PCN treatment on the duodenum of C57BL/6N mice.

(Submitter supplied) C57BL/7N mice were fed high-fat diet (HFD) and treated with Pregnenolone-16alfa-carbonitrile (PCN), a selective murine PXR agonist, and duodenal effects of the high-fat diet feeding and PCN treatment were studied.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21626
12 Samples
Download data: TXT
Series
Accession:
GSE163407
ID:
200163407
13.

Transcriptomic effect of high-fat diet and PCN treatment on the livers of of PXR deficient mice

(Submitter supplied) PXR deficient mice were fed high-fat diet (HFD) and treated with PCN, a selective murine PXR agonist, and hepatic effects of the high-fat diet feeding and PCN treatment were studied.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21626
12 Samples
Download data: TXT
Series
Accession:
GSE162196
ID:
200162196
14.

Effect of PCN on CAR and PXR regulated genes involved in circadian rhythm, drug metabolism and cholesterol homeostasis

(Submitter supplied) The nuclear receptor PXR (Pregnane X rreceptor) mediates the effects of pregnenolone-16alpha-carbonitrile (PCN) on gene transcription. The relative role of PXR and also CAR to the induction response by PCN was studied on cDNA arrays containing 320 (Steroltalk V2) genes (genes involved in cyrcadian rhythm, drug metabolism, cholesterol biosynthesis, sterol synthesis/transport, heme synthesis). Samples from livers of wild type and CAR-/-, PXR-/- or CAR/PXR-/- knockout mice were tested after treatment with PCN for gene expression within the European Framework V program “Steroltalk” (www.steroltalk.net). more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL7190
24 Samples
Download data: TXT
Series
Accession:
GSE12537
ID:
200012537
15.

Phenobarbital and TCPOBOP effects on CAR and PXR regulated genes involved in drug metabolism and cholesterol homeostasis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL7138
44 Samples
Download data: TXT
Series
Accession:
GSE12529
ID:
200012529
16.

Effect of TCPOBOP on CAR and PXR regulated genes involved in drug metabolism and cholesterol homeostasis

(Submitter supplied) The nuclear receptor CAR (constitutive androstane receptor) mediates the effects of 1,4-bis[2-(3,5-dichloropyridyloxy)]benzene (TCPOBOP) on gene transcription. To investigate the relative role of CAR and also PXR in the induction response, cDNA arrays were generated containing 120 (Sterolgene V1) genes which are known to be regulated with these or related nuclear receptors (genes involved in drug metabolism, cholesterol biosynthesis, sterol synthesis/transport, heme synthesis). more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL7138
20 Samples
Download data: TXT
Series
Accession:
GSE12509
ID:
200012509
17.

Effect of phenobarbital on CAR and PXR regulated genes involved in drug metabolism and cholesterol homeostasis

(Submitter supplied) The nuclear receptors CAR (constitutive androstane receptor) and PXR (pregnane X receptor) mediate the effects of phenobarbital (PB) on gene transcription. To investigate the relative role of CAR and PXR in the induction response, cDNA arrays were generated containing 120 genes which are known to be regulated with these or related nuclear receptors (genes involved in drug metabolism, cholesterol biosynthesis, sterol synthesis/transport, heme synthesis). more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL7138
24 Samples
Download data: TXT
Series
Accession:
GSE12489
ID:
200012489
18.

A Novel Statistical Algorithm for Gene Expression Analysis Differentiates PXR-Dependent and Independent Mechanisms of Toxicity

(Submitter supplied) The objective of the present study is to examine the potential role of the pregnane x receptor (PXR) in mice treated with an small molecule inhibitor for beta-secretase (CMP013)
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL1261
20 Samples
Download data: CEL
Series
Accession:
GSE23780
ID:
200023780
19.

Gene expression profiling of livers from cafestol-fed APOE3Leiden mice

(Submitter supplied) Unfiltered coffee markedly increases serum lipid levels in humans and mice. The responsible compounds are the fat-soluble diterpenes cafestol and kahweol. Cafestol is responsible for more than 80% of the effect on serum lipids and is the most potent cholesterol-elevating compound known in the human diet. Aim of these microarray studies was to identify novel genes and regulatory pathways determining the cholesterol raising effect of cafestol by genome-wide expression studies. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL3239
16 Samples
Download data
Series
Accession:
GSE3809
ID:
200003809
20.

Expression data from adult Rattus liver

(Submitter supplied) Activation of the pregnane X receptor (NR1I2) by drugs and other xenobiotics stimulates (or suppresses) expression of numerous genes involved in the metabolic elimination of foreign compounds and some toxic endogenous substrates. We used microarray analysis to identify genes whose expression in rat liver was significantly altered by pregnenolone 16alpha-carbonitrile (PCN) treatment. Keywords: a single ip injection of PCN (100 mg/kg), 8 h treatment
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Datasets:
GDS2093 GDS2094
Platforms:
GPL341 GPL342
19 Samples
Download data
Series
Accession:
GSE4959
ID:
200004959
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