GEO DataSets

(Submitter supplied) Using 270K Nimblegen Comparative Genomic Hybridization (CGH) array on a set of cv. Chinese Spring deletion lines, a total of 3,671 sequence contigs and scaffolds (~7.8% of chromosome 7B physical length) were mapped into nine deletion bins. In our study we have developed 270K CGH Nimblegen array containing wheat 7B chromosome specific probes and genotyped wheat 7B deletion stocks which have terminal deletions in 7B. more...

Organism:

Triticum turgidum subsp. durum; Triticum aestivum

Type:

Genome variation profiling by genome tiling array

Platform:

GPL18665

22 Samples

Download data: PAIR

(Submitter supplied) A NimbleGen array containing both gene-based and RJM repeat junction probe sequences derived from Ae. Tauschii was developed and used to map the Chinese Spring nullisomic-tetrasomic lines and deletion bin lines of the D genome chromosomes.

Organism:

Triticum aestivum; Aegilops tauschii

Type:

Genome variation profiling by genome tiling array

Platform:

GPL20725

96 Samples

Download data: PAIR

(Submitter supplied) The use of a graduated series of Arabidopsis thaliana genomic deletion mutations (of sizes ranging from 4 bp to ~5 kb) to optimize CGH-based genomic deletion detection

Organism:

Arabidopsis thaliana

Type:

Genome variation profiling by genome tiling array

Platform:

GPL18327

5 Samples

Download data: PDF, TXT