GEO DataSets

(Submitter supplied) Saccharomyces cerevisiae cannot metabolize cellobiose in nature. Here, S. cerevisiae was engineered to achieve cellobiose utilization by introducing both a cellodextrin transporter gene (cdt-1) and an intracellular β-glucosidase gene (gh1-1) from Neurospora crassa. We sequenced mRNA from anaerobic exponential cultures of engineered S. cerevisiae grown on cellobiose or glucose as a single carbon source in biological triplicate. more...

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by high throughput sequencing

Platform:

GPL9377

6 Samples

Download data: XLSX

(Submitter supplied) Response of Saccharomyces cerevisiae engineered for xylose metabolism to changes in carbon source and aeration Keywords: ordered

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array

Dataset:

GDS908

Platform:

GPL90

6 Samples

Download data

Strain YSX3 engineered for D-xylose utilization and respiration-deficient mutant FPL-YSX3P were grown under full aeration or oxygen limitation, with glucose or xylose as a carbon source.

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array, count, 2 growth protocol, 2 protocol, 2 strain sets

Platform:

GPL90

Series:

GSE835

6 Samples

Download data

(Submitter supplied) In the present study transcriptome and proteome of recombinant, xylose-utilising S. cerevisiae grown in aerobic batch cultures on xylose were compared with glucose-grown cells both in glucose repressed and derepressed states. The aim was to study at genome-wide level how signalling and carbon catabolite repression differed in cells grown on either glucose or xylose. The more detailed knowledge about is xylose sensed as a fermentable carbon source, capable of catabolite repression like glucose, or is it rather recognised as a non-fermentable carbon source is important in achieving understanding for further engineering this yeast for more efficient anaerobic fermentation of xylose.

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array

Platform:

GPL90

15 Samples

Download data: CEL, CHP

(Submitter supplied) To understrand the altered gene expressions of cellobiose-positive C. glutamicum over cellobiose-negative C. glutamicum

Organism:

Corynebacterium glutamicum

Type:

Expression profiling by array

Platform:

GPL14656

7 Samples

Download data: GPR

(Submitter supplied) Transcriptional landscape of MyceliopTranscriptional profiling of Myceliophthora thermophila on galactose and metabolic engineering for improved galactose utilization thora thermophila responding to soluble starch and the role of regulator AmyR on polysaccharide degradation Efficient biological conversion of all sugars from lignocellulosic biomass is necessary for cost-effective production of biofuels and commodity chemicals. more...

Organism:

Thermothelomyces thermophilus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL27455

12 Samples

Download data: XLSX