GEO DataSets

(Submitter supplied) Expression profiling of a total of 7281 transcripts was compared between control and heat shock conditions.

Organism:

Mesorhizobium japonicum MAFF 303099

Type:

Expression profiling by array

Platform:

GPL16511

6 Samples

Download data: TXT

(Submitter supplied) Expression profiling of a total of 7281 transcripts was compared between control and acidic shock conditions.

Organism:

Mesorhizobium japonicum MAFF 303099

Type:

Expression profiling by array

Platform:

GPL16511

6 Samples

Download data: TXT

(Submitter supplied) Expression profiling of a total of 7281 transcripts was compared between control and salt shock conditions.

Organism:

Mesorhizobium japonicum MAFF 303099

Type:

Expression profiling by array

Platform:

GPL16511

6 Samples

Download data: TXT

(Submitter supplied) Legumes interact with rhizobial bacteria to form nitrogen-fixing root nodules. Host signalling following mutual recognition ensures a specific response, but is only partially understood. Focusing on the stage of epidermal infection with Mesorhizobium loti, we analysed endogenous small RNAs (sRNAs) of the model legume Lotus japonicus to investigate their involvement in host response regulation. We used Illumina sequencing to annotate the L. more...

Organism:

Lotus japonicus

Type:

Non-coding RNA profiling by high throughput sequencing

Platforms:

GPL20925 GPL21565

4 Samples

Download data: XLSX

(Submitter supplied) Arctic Mesorhizobium strain N33 was isolated from nodules of the Oxytropis arctobia in Canada’s eastern Arctic. This symbiotic bacterium can grow from 0 to 30°C, is one of the best known cold-adapted rhizobia, and can fix nitrogen at ~10°C. Here, the key molecular mechanisms of cold adaptation were investigated by determining changes in transcript profiles when cells were treated under eight different temperature conditions, including both sustained and transient cold treatments compared with cells grown at room temperature.

Organism:

Mesorhizobium sp. N33

Type:

Expression profiling by array

Platform:

GPL19113

42 Samples

Download data: GPR

(Submitter supplied) Mesorhizobium metallidurans STM 2683 and Mesorhizobium sp. strain STM 4661 were isolated from nodules of the metallicolous legume Anthyllis vulneraria from distant mining spoils. They tolerate unusually high zinc and cadmium concentrations as compared to other mesorhizobia. This work aims to study the gene expression profiles associated with zinc or cadmium exposure and to identify genes involved in metal tolerance in these two metallicolous Mesorhizobium strains of interest for mine phytostabilization purposes.

Organism:

Mesorhizobium sp. STM 4661; Mesorhizobium metallidurans STM 2683

Type:

Expression profiling by high throughput sequencing

Platforms:

GPL16949 GPL16973

6 Samples

Download data: TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Mesorhizobium huakuii 7653R

Type:

Expression profiling by array; Expression profiling by high throughput sequencing

Platforms:

GPL17314 GPL17317

8 Samples

Download data: PAIR, XLS

(Submitter supplied) Mesorhizobium huakuii 7653R is an α-proteobacterium that occurs either in a nitrogen-fixing symbiosis with its host plant, A. sinicus, or free-living in the soil. We performed RNA-Seq on free-living cells grown in rich media and in bacteroids isolated from root nodules to understand how M. huakuii 7653R responds to alterations in its environment and to the physiological changes that occur during bacteroid differentiation. more...

Organism:

Mesorhizobium huakuii 7653R

Type:

Expression profiling by high throughput sequencing

Platform:

GPL17317

2 Samples

Download data: XLS

(Submitter supplied) Mesorhizobium huakuii 7653R is an α-proteobacterium that occurs either in a nitrogen-fixing symbiosis with its host plant, A. sinicus, or free-living in the soil. Investigation of whole genome gene expression level changes in Bacteroids compared to the free-living cells. Understand how M. huakuii 7653R responds to alterations in its environment and to the physiological changes that occur during bacteroid differentiation.

Organism:

Mesorhizobium huakuii 7653R

Type:

Expression profiling by array

Platform:

GPL17314

6 Samples

Download data: PAIR