Similar studies for GEO DataSets (Select 200026961) - GEO DataSets

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Items: 20

Select item 2000269611.

(Submitter supplied) Genome-wide transcriptional profiling of cells subjected to a H2O2 shock treatment (10 mM for 10 minutes).

Organism:: Bradyrhizobium diazoefficiens USDA 110; Bradyrhizobium japonicum

Type:: Expression profiling by array

Platform:: GPL5341
6 Samples

Download data: GPR

Series

Accession:: GSE26961

ID:: 200026961

Select item 2000269602.

Bj H2O2 prolonged exposure vs. non-treatment

(Submitter supplied) Genome-wide transcriptional profiling of cells exposed to 0.3 mM H2O2 from time of inoculation.

Organism:: Bradyrhizobium diazoefficiens USDA 110; Bradyrhizobium japonicum

Type:: Expression profiling by array

Platform:: GPL5341
6 Samples

Download data: GPR

Series

Accession:: GSE26960

ID:: 200026960

Select item 2000091253.

Transcriptional and Physiological Responses of Bradyrhizobium japonicum to Desiccation-Induced Stress

(Submitter supplied) The growth and persistence of rhizobia and bradyrhizobia in soils are negatively impacted by drought conditions. In this study, we used genome-wide transcriptional analyses to obtain a comprehensive understanding of the response of Bradyrhizobium japonicum to drought. Desiccation of cells resulted in the differential expression of 15 to 20% of the 8,480 B. japonicum open reading frames, with considerable differentiation between early (after 4 h) and late (after 24 and 72 h) expressed genes. more...

Organism:: Bradyrhizobium japonicum; Bradyrhizobium diazoefficiens USDA 110

Type:: Expression profiling by array

Platform:: GPL5341
18 Samples

Download data: GPR

Series

Accession:: GSE9125

ID:: 200009125

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000369134.

Bj_indole-3-acetic acid 1 mM vs. non-treatment

(Submitter supplied) Transcriptional profiling of mid-logarithmic phase cultures exposed to a 1 mM shock treatment of indole-3-acetic acid for 3 hours.

Organism:: Bradyrhizobium diazoefficiens USDA 110; Bradyrhizobium japonicum

Type:: Expression profiling by array

Platform:: GPL5341
6 Samples

Download data: GPR

Series

Accession:: GSE36913

ID:: 200036913

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000265315.

Bj Paraquat

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Bradyrhizobium diazoefficiens USDA 110; Bradyrhizobium japonicum

Type:: Expression profiling by array

Platform:: GPL5341
12 Samples

Download data: GPR

Series

Accession:: GSE26531

ID:: 200026531

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000262526.

Bj Paraquat prolonged exposure vs. non-treatment

(Submitter supplied) Genome-wide transcriptional profiling of cells exposed to 0.1 mM paraquat from time of inoculation.

Organism:: Bradyrhizobium japonicum; Bradyrhizobium diazoefficiens USDA 110

Type:: Expression profiling by array

Platform:: GPL5341
6 Samples

Download data: GPR

Series

Accession:: GSE26252

ID:: 200026252

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000262367.

Bj Paraquat fulminant shock vs. non-treatment

(Submitter supplied) Genome-wide transcriptional profiling of cells subjected to a paraquat fulminant shock treatment (5mM for 10 minutes).

Organism:: Bradyrhizobium japonicum; Bradyrhizobium diazoefficiens USDA 110

Type:: Expression profiling by array

Platform:: GPL5341
6 Samples

Download data: GPR

Series

Accession:: GSE26236

ID:: 200026236

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000699998.

Characterization of AceA regulons in Bradyrhizobium japonicum under desiccation stress

(Submitter supplied) Differential gene expression was analyzed between B. japonicum wild type (Bj110) and aceA mutant (BjΔaceA) exposed to desiccation stress to find AceA regulons under the culture condition.

Organism:: Bradyrhizobium japonicum; Bradyrhizobium diazoefficiens USDA 110

Type:: Expression profiling by array

Platform:: GPL5341
6 Samples

Download data: GPR

Series

Accession:: GSE69999

ID:: 200069999

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000190399.

Whole-Genome Transcriptional analysis of Sulfate and Sulfonate assimilation by Bradyrhizobium japonicum USDA 110

(Submitter supplied) The ability of Bradyrhizobium japonicum and B. elkanii strains to utilize alkane and aromatic sulfonates as sole sources of sulfur for growth was investigated. All of the strains tested were able to utilize alkane sulfonates, but not aromatic sulfonates for growth. Whole-genome transcriptional profiling was used to assess B. japonicum USDA 110 genes involved in growth on alkane sulfonates, as compared to growth on sulfate and cysteine. more...

Organism:: Bradyrhizobium japonicum

Type:: Expression profiling by array

Platform:: GPL5341
12 Samples

Download data: GPR

Series

Accession:: GSE19039

ID:: 200019039

Select item 20001034010.

Transcription profiling of soybean nodulation by Bradyrhizobium japonicum

(Submitter supplied) Legumes interact with nodulating bacteria that convert atmospheric nitrogen into ammonia for plant use. This nitrogen fixation takes place within root nodules that form after infection of root hairs by compatible rhizobia. Using cDNA microarrays, we monitored gene expression in soybean (Glycine max) inoculated with the nodulating bacterium Bradyrhizobium japonicum 4, 8, and 16 days after inoculation (dai), time points that coincided with nodule development and the onset of nitrogen fixation. more...

Organism:: Glycine max

Type:: Expression profiling by array

Platforms:: GPL3015 GPL6009
56 Samples

Download data: GPR

Series

Accession:: GSE10340

ID:: 200010340

Select item 20000847811.

Genome-wide transcript analysis of Bradyrhizobium japonicum bacteroids in soybean root nodules

(Submitter supplied) Expression data from B. japonicum soybean root nodules including a nodulation time-course experiment with soybean nodules harvested at 10, 13, 21 and 31 dpi and transcriptome of bacteroids formed by a mutant defective in the RNA polymerase transcription factor sigma 54. Two reference data sets were established using B. japonicum cells grown in PSY medium under either aerobic or micro-aerobic conditions. more...

Organism:: Glycine max; Bradyrhizobium diazoefficiens USDA 110; Bradyrhizobium japonicum

Type:: Expression profiling by array

Datasets:: GDS3120 GDS3121 GDS3122
Platform:: GPL3401
71 Samples

Download data: CEL, CHP

Series

Accession:: GSE8478

ID:: 200008478

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 312212.

Transcription factor sigma54-deficient rhizobial bacteroids from determinate soybean root nodules

Comparison of sigma54-deficient mutant strain N50-97 bacteroids with wild type bacteroids, both at 21 days postinoculation. The mutants are able to elicit soybean nodules but unable to carry out symbiotic nitrogen fixation. Results provide insight into the sigma 54 regulon in symbiosis.

Organism:: Bradyrhizobium japonicum; Bradyrhizobium diazoefficiens USDA 110

Type:: Expression profiling by array, count, 2 genotype/variation, 3 growth protocol sets

Platform:: GPL3401
Series:: GSE8478
59 Samples

Download data: CEL, CHP

DataSet

Accession:: GDS3122

ID:: 3122

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 312113.

Rhizobial bacteroids from determinate soybean root nodules: time course

Analysis of soybean nodules at 10, 13, 21, and 31 days postinoculation, having relative symbiotic nitrogen-fixation activities of 9, 95, 100, and 61%, respectively. Results provide insight into genes expressed early and late in bacteroid development.

Organism:: Bradyrhizobium japonicum; Bradyrhizobium diazoefficiens USDA 110

Type:: Expression profiling by array, count, 4 time sets

Platform:: GPL3401
Series:: GSE8478
13 Samples

Download data: CEL, CHP

DataSet

Accession:: GDS3121

ID:: 3121

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 312014.

Rhizobial bacteroids from determinate soybean root nodules

Analysis of bacteroids harvested from soybean nodules at 21 days postinoculation (dpi), a timepoint of maximal nitrogen-fixation activity. Free-living cells grown in aerobic or microaerobic culture also examined. Results provide insight into the genetic basis underlying the conversion to symbiosis.

Organism:: Bradyrhizobium japonicum; Bradyrhizobium diazoefficiens USDA 110

Type:: Expression profiling by array, count, 3 growth protocol sets

Platform:: GPL3401
Series:: GSE8478
42 Samples

Download data: CEL, CHP

DataSet

Accession:: GDS3120

ID:: 3120

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 20000804215.

Bj_Bacteroid

(Submitter supplied) Transcriptional profiling of bacteroids isolated from the soybean root nodules. Keywords: life style comparison

Organism:: Bradyrhizobium japonicum; Bradyrhizobium diazoefficiens USDA 110

Type:: Expression profiling by array

Platform:: GPL5341
6 Samples

Download data: GPR

Series

Accession:: GSE8042

ID:: 200008042

Select item 20000803616.

Bj_Salt

(Submitter supplied) Functional genomics of B. japonicum exposed to osmotic stress caused by 50 mM NaCl. Keywords: stress response

Organism:: Bradyrhizobium japonicum; Bradyrhizobium diazoefficiens USDA 110

Type:: Expression profiling by array

Platform:: GPL5341
4 Samples

Download data: GPR

Series

Accession:: GSE8036

ID:: 200008036

Select item 20000803317.

Bj_Minimal_Rich

(Submitter supplied) Functional genomics of B. japonicum in minimal vs. rich medium. Different nutritional status was compared. Keywords: stress response

Organism:: Bradyrhizobium diazoefficiens USDA 110; Bradyrhizobium japonicum

Type:: Expression profiling by array

Platform:: GPL5341
6 Samples

Download data: TXT

Series

Accession:: GSE8033

ID:: 200008033

Select item 20002140018.

Autoregulation of fixK2 gene expression in Bradyrhizobium japonicum

(Submitter supplied) Expression data from B. japonicum bll2758::aphII strain (7414) grown micro-oxically. This study includes also the expression data of a fixK2 and a fixJ mutant grown in free-living micro-oxic condition (samples GSM313721 to GSM313734 in GEO record number GSE12491) and the wild type strain grown micro-oxically (samples GSM210246 to GSM210268 in GEO record number GSE8478).

Organism:: Bradyrhizobium diazoefficiens USDA 110; Bradyrhizobium japonicum

Type:: Expression profiling by array

Platform:: GPL3401
40 Samples

Download data: CEL, CHP

Series

Accession:: GSE21400

ID:: 200021400

Select item 20001249119.

Comprehensive assessment of the regulons controlled by the FixLJ-FixK2-FixK1 cascade in Bradyrhizobium japonicum

(Submitter supplied) Genome-wide transcription profiling of B. japonicum fixJ, fixK2, and fixK1 mutant strains which were grown in free-living microoxic condition, and in the case of the fixK1 mutant also in anoxic condition. Transcriptomes of nodules from soybean plants infected with the fixJ or fixK2 mutant strains were investigated, too. This study includes also the expression data of a nifA mutant grown in free-living anoxic condition. more...