GEO DataSets

Expression profiling of 293T cells depleted for lens epithelium-derived growth factor (LEDGF/p75). LEDGF/p75 binds to HIV integrase. Results identify LEDGF/p75 regulated genes, which may be preferential targets of HIV integration.

Organism:

Homo sapiens

Type:

Expression profiling by array, count, 2 protocol sets

Platform:

GPL570

Series:

GSE3485

8 Samples

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(Submitter supplied) The LEDGF transcript from the PSIP1 gene was knocked down using RNAi technology. The resulting 293T derived cell line (293TsiLL) was compared to a control cell line (293TsiScram) using microarray analysis. Genes identified as being modulated by LEDGF were preferential targets of HIV integration. Keywords: gene knockdown effects

Organism:

Homo sapiens

Type:

Expression profiling by array

Dataset:

GDS1580

Platform:

GPL570

8 Samples

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(Submitter supplied) In this reanalysis, 20 GSM series were reanalyzed for ChIp-Seq data.

Organism:

Homo sapiens

Type:

Third-party reanalysis; Genome binding/occupancy profiling by high throughput sequencing

Download data: TXT

(Submitter supplied) In this reanalysis, 9 GSM series were reanalyzed to obtain the genomic coordinates of speckles-associated domains.

Organism:

Homo sapiens

Type:

Third-party reanalysis; Other

Download data: BED, TXT, WIG