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Items: 1 to 20 of 31

1.

Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample

(Submitter supplied) Analyses of ancient DNA typically involve sequencing the surviving short oligonucleotides, and aligning to genome assemblies from related, modern species. Here, we report that skin from a female woolly mammoth (†Mammuthus primigenius) which died 52,000 years ago retained its ancient genome architecture. We use PaleoHi-C to map chromatin contacts and assemble its genome, yielding twenty-eight chromosome-length scaffolds. more...
Organism:
Equus asinus; Mammuthus primigenius; Bos taurus; Elephas maximus indicus; Homo sapiens
Type:
Other; Third-party reanalysis
10 related Platforms
136 Samples
Download data: BED, BEDGRAPH, BEDPE, FASTA, HIC, SW, TXT, XLSX
Series
Accession:
GSE268050
ID:
200268050

2.

NextSeq 550 (Mammuthus primigenius)

Organism:
Mammuthus primigenius
1 Series
1 Sample
Download data
Platform
Accession:
GPL34503
ID:
100034503

3.

Illumina NovaSeq 6000 (Mammuthus primigenius)

Organism:
Mammuthus primigenius
1 Series
4 Samples
Download data
Platform
Accession:
GPL34502
ID:
100034502

4.

DNBSEQ-G400 (Mammuthus primigenius)

Organism:
Mammuthus primigenius
1 Series
22 Samples
Download data
Platform
Accession:
GPL34501
ID:
100034501

5.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6310, PeloHi-C lib id: S_mm_eth_sup_505

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34502
Series:
GSE268050
Download data
Sample
Accession:
GSM8285004
ID:
308285004

SRA Run Selector

6.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6310, PeloHi-C lib id: S_mm_eth_504

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34502
Series:
GSE268050
Download data
Sample
Accession:
GSM8285003
ID:
308285003

SRA Run Selector

7.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6310, PeloHi-C lib id: A_mm_eth_sup_502

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34502
Series:
GSE268050
Download data
Sample
Accession:
GSM8285002
ID:
308285002

SRA Run Selector

8.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6310, PeloHi-C lib id: A_mm_eth_501

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34502
Series:
GSE268050
Download data
Sample
Accession:
GSM8285001
ID:
308285001

SRA Run Selector

9.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 532

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285018
ID:
308285018

SRA Run Selector

10.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 531

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285017
ID:
308285017

SRA Run Selector

11.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 528

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285016
ID:
308285016

SRA Run Selector

12.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 527

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285015
ID:
308285015

SRA Run Selector

13.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 522

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285014
ID:
308285014

SRA Run Selector

14.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 521

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285013
ID:
308285013

SRA Run Selector

15.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 516

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285012
ID:
308285012

SRA Run Selector

16.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 515

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285011
ID:
308285011

SRA Run Selector

17.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 510

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285010
ID:
308285010

SRA Run Selector

18.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 509

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285009
ID:
308285009

SRA Run Selector

19.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 507

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285008
ID:
308285008

SRA Run Selector

20.

PaleoHi-C of Mammuthus primigenius DNA Zoo Sample6311, PeloHi-C lib id: 504

Organism:
Mammuthus primigenius
Source name:
skin
Platform:
GPL34501
Series:
GSE268050
Download data
Sample
Accession:
GSM8285007
ID:
308285007

SRA Run Selector

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