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Items: 3

1.

TEAL-seq (Targeted Expression Analysis Sequencing) of S. aureus and S. epidermidis in TSB and skin-relevent conditions

(Submitter supplied) Metagenome sequencing enables discovery and genetic characterization of complex microbial communities from diverse ecosystems. However, determining the activity of isolates within a community using transcriptomics presents several challenges including the wide dynamic range of organismal and gene expression abundances, the presence of host RNA, and low microbial biomass at many body sites. To address these limitations, we developed “Targeted Expression Analysis Sequencing” or TEAL-seq. more...
Organism:
Escherichia coli; Staphylococcus aureus; Mus musculus; Staphylococcus epidermidis; Homo sapiens
Type:
Expression profiling by high throughput sequencing
6 related Platforms
129 Samples
Download data: XLSX
Series
Accession:
GSE279187
ID:
200279187
2.

Illumina NovaSeq 6000 (Staphylococcus aureus; Staphylococcus epidermidis)

Organism:
Staphylococcus aureus; Staphylococcus epidermidis
1 Series
86 Samples
Download data
Platform
Accession:
GPL34976
ID:
100034976
3.

SPE_RHE_SE_SA

Organism:
Staphylococcus aureus; Staphylococcus epidermidis
Source name:
bacterial culture
Platform:
GPL34976
Series:
GSE279187
Download data
Sample
Accession:
GSM8563800
ID:
308563800
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db=gds|term=GSM8563800[Accession]|query=1|qty=6|blobid=MCID_674919e843705129cf525448|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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