GSM6915614[Accession] - GEO DataSets

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Items: 4

Select item 2002063651.

HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions.

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Solanum lycopersicum

Type:: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing

Platform:: GPL21762
79 Samples

Download data: BIGWIG, NARROWPEAK, TXT

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Accession:: GSE206365

ID:: 200206365

PubMed Full text in PMC Similar studies

Select item 2002063582.

HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [ChIP-seq]

(Submitter supplied) To investigate the HSFA1a, a master regulator of heat stress response, plays a key role in this reorganization by promoting the formation of promoter/enhancer chromatin loops. To determine if a typical chromatin signature could differentiate distal and proximal REs, we performed ChIP-seq experiments and analyzed the levels of four histone covalent modifications that are permissive for transcription: H3K4me3, H3K9ac, H3K18ac and H3K27ac at 0, 1 and 6 hours after heat stress on both proximal and distal REs specifically active at 1 hour after HS. more...