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Items: 4

1.

Study for evaluating the effect of cold ischemic time and RNA stabilization method on RNA integrity and gene expression measurements

(Submitter supplied) Time series of eleven breast cancer samples subjected to different cold ischemic stress of up to 3 hr post tumor excision. A different 2x2 factorial within this study evaluated the effect of stabilization method (RNAlater vs snap freezing) and stablization delay (0 and 40 min) at room temperature.
Organism:
Homo sapiens
Type:
Expression profiling by array
Dataset:
GDS4088
Platform:
GPL96
86 Samples
Download data: CEL
Series
Accession:
GSE25011
ID:
200025011
2.
Full record GDS4088

Variable breast cancer tumor sample collection methods

Analysis of breast tumor samples preserved using 2 different RNA stabilization methods (RNAlater or snap freezing) up to 3 hours post tumor excision. Results provide insight into the effects of tissue handling on RNA integrity and microarray measurements from resected breast cancers.
Organism:
Homo sapiens
Type:
Expression profiling by array, transformed count, 11 individual, 35 other, 2 protocol, 6 time sets
Platform:
GPL96
Series:
GSE25011
86 Samples
Download data: CEL
3.

[HG-U133A] Affymetrix Human Genome U133A Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 08, 2012: annotation table updated with netaffx build 32 June 24, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site The U133 set includes 2 arrays with a total of 44928 entries and was indexed 29-Jan-2002. more...
Organism:
Homo sapiens
364 DataSets
1125 Series
11 Related Platforms
42430 Samples
Download data
Platform
Accession:
GPL96
ID:
100000096
4.

MD52-T0-F (no RNAlater)

Organism:
Homo sapiens
Source name:
breast cancer tissue, patient MD52, flash frozen, 0 min ischemic time
Platform:
GPL96
Series:
GSE25011
Dataset:
GDS4088
Download data: CEL
Sample
Accession:
GSM614443
ID:
300614443
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