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Items: 3

1.

The NMD endonuclease SMG6 co-operates with the piRNA pathway in germ granules to shape the male germ cell transcriptome

(Submitter supplied) Nonsense-mediated RNA decay (NMD) is a conserved RNA turnover pathway. Here we report that the sole endonuclease in the NMD pathway, SMG6, is essential for the male germline. Germ-cell conditional knockout (cKO) of Smg6 causes complete arrest of spermatogenesis at the early haploid cell stage. Smg6-cKO round spermatids accumulate NMD target mRNAs with long 3’ untranslated regions (UTRs) and fail to eliminate transcripts normally expressed during meiosis, the previous step in spermatogenesis. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platforms:
GPL24247 GPL21493
35 Samples
Download data: TXT
Series
Accession:
GSE182518
ID:
200182518
2.

Illumina HiSeq 3000 (Mus musculus)

Platform
Accession:
GPL21493
ID:
100021493
3.

RNA-seq cKO RS 3

Organism:
Mus musculus
Source name:
testis
Platform:
GPL21493
Series:
GSE182518
Download data
Sample
Accession:
GSM5530709
ID:
305530709
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db=gds|term=GSM5530709[Accession]|query=1|qty=2|blobid=MCID_674997d786d4ad4f7f683066|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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