GEO DataSets

(Submitter supplied) An Infinium microarray platform (GPL28271, HorvathMammalMethylChip40) was used to generate DNA methylation data from several tissues in several bat species. Tissues: skin (wing punches), liver, brain, skeletal muscle.

Organism:

Tadarida brasiliensis; Carollia perspicillata; Eidolon helvum; Pteropus rodricensis; Myotis brandtii; Pteropus giganteus; Pteropus pumilus; Leptonycteris yerbabuenae; Pteropus poliocephalus; Pteropus hypomelanus; Phyllostomus hastatus; Eptesicus fuscus; Nyctalus noctula; Cynopterus brachyotis; Rhinolophus ferrumequinum; Myotis vivesi; Artibeus jamaicensis; Antrozous pallidus; Homo sapiens; Mus musculus; Molossus molossus; Nycticeius humeralis; Myotis myotis; Saccopteryx bilineata; Phyllostomus discolor; Pteropus vampyrus; Rousettus aegyptiacus; Desmodus rotundus; Rattus norvegicus; Myotis lucifugus; Rhynchonycteris naso

Type:

Methylation profiling by array

Platform:

GPL28271

908 Samples

Download data: DOCX, IDAT, TXT

(Submitter supplied) Developed in the labs of Steve Horvath and Jason Ernst. The mammalian array platform applies to ALL mammals (humans, mouse, rat, sheep, horses, pigs, etc.). The array design is similar to the Illumina Infinium 450K array but it contains fewer up to 37492 CpGs. Additional material can be found on the Github page https://github.com/shorvath/MammalianMethylationConsortium/ A vignette on using the mammal methylation array with SeSAMe is available from https://bioconductor.org/packages/release/bioc/vignettes/sesame/inst/doc/mammal.html. more...

Organism:

Homo sapiens; Mus musculus; Rattus norvegicus

49 Series

22420 Samples

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