GEO DataSets

(Submitter supplied) DNA microarray technology allows the analysis of genome structure and dynamics at genome-wide scale. Expression microarrays (EMA) contain probes for annotated open reading frames (ORF) and are widely used for the analysis of differential gene expression. By contrast, tiling microarrays (TMA) have a much higher probe density and provide unbiased genome-wide coverage. The purpose of this study was to develop a protocol that would take advantage of the high resolution of TMAs for quantitative measurement of DNA strand-specific differential expression of annotated and non-annotated transcripts. more...

Organism:

Schizosaccharomyces pombe; Schizosaccharomyces pombe 972h-

Type:

Expression profiling by array; Expression profiling by genome tiling array

Platforms:

GPL9671 GPL9672

8 Samples

Download data: CEL

(Submitter supplied) Affymetrix S. pombe Tiling 1.0FR(GPL7715) Array based on a custom CDF (Sp-TMA.cdf) for Schizosaccharomyces pombe. Identical to GPL7715 but a custom cdf environment was used to extract data. To obtain the custom CDF we filter probes present in Affymetrix S. pombe Tiling 1.0FR Array mapping against the Sanger Centre Schizosaccharomyces pombe genome annotation release of July 17, 2009. Protocol: see the Affymetrix website

Organism:

Schizosaccharomyces pombe

1 Series

1 Related Platform

4 Samples

Download data: CDF